Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0109 |
Symbol | |
ID | 4078694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 115503 |
End bp | 116159 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005396 |
Product | phosphoglycerate mutase |
Protein accession | YP_612104 |
Protein GI | 99079950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAA TCACACTGGT CCGTCACGGC CAGGCCAATA CCGCGGCACG GGATGAAGCC AGCTACGACA AGCTGAGCCC CCTTGGCCAT CAGCAAGCGC AATGGCTCGG CGACCATCTG CGCGACTGCA AAGACCATTA CGCACGCGTC TATTGTGGTA CCCTGACCCG GCACGAGGAA ACCGCCCGCG CCATGGGGTT CGACGCAGGT GATATCATCC GTGATCCCCG CCTCAACGAA ATGGAATACT TTACGCTTGC ACAGGCGATG GAAGCTCAGC ACGGGCTGGC CATTCCCAAG GAGCGTGAGG GCTTTGTCGC CCATCTGCCA AAGGTTTTTG CCGCGTGGGA AGCAGACTGT ATCGATACCC CTCCCGAAAG CTGGCGCGAC TTTGAAACCC GCACCAAAGC CGCCTTGGCA GAGATCTCAG AAGGCGAAGG CCCTGCTCTG GTGGTCACCT CCGGCGGGTT GATTTCCATG GTGATGCGTC AGTGCCTTGG ATTGGATACT GCCGCCACAG CACGCATCGC GCTTGCGATC ATGAACACCT CGCTGCACCG TCTGCACAAC ATCGGCGGCA CCTATGCGCC AGTGCTGTTC AACGGTGTCC CGCATCTCCA AGCCCCCGAT CGCCAGTATG CGCGCACCCA TCTCTGA
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Protein sequence | MSEITLVRHG QANTAARDEA SYDKLSPLGH QQAQWLGDHL RDCKDHYARV YCGTLTRHEE TARAMGFDAG DIIRDPRLNE MEYFTLAQAM EAQHGLAIPK EREGFVAHLP KVFAAWEADC IDTPPESWRD FETRTKAALA EISEGEGPAL VVTSGGLISM VMRQCLGLDT AATARIALAI MNTSLHRLHN IGGTYAPVLF NGVPHLQAPD RQYARTHL
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