Gene TM1040_0102 details

Gene Information

• Locus tag: TM1040_0102
• Symbol: mutL
• ID: 4078687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 107657
• End bp: 109591
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638005389
• Product: DNA mismatch repair protein
• Protein accession: YP_612097
• Protein GI: 99079943
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0323] DNA mismatch repair enzyme (predicted ATPase)
• TIGRFAM ID: [TIGR00585] DNA mismatch repair protein MutL

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACAC TCGACCCCCA AATCAGCGAA AAACCACCGA TTGAGGCGCC GGCCAAACCC 
GCGCGCCCCG TGATCCGGCA ACTGGATGAC GGCGCCATCA ACCGCATTGC GGCTGGTGAG 
GTGGTCGAGC GTCCGGCCTC GGCCGTCAAG GAACTTGTGG AGAACGCCAT CGACGCCGGT 
GCGACCCGCA TCACGGTAGA GATCGCCGAT GGTGGTAAGA CGCTGATCCG GGTGATCGAC 
AATGGCTGCG GGATGACACC AGAGGACCTG CCGTTGGCGC TGTCGCGTCA TGCGACTTCC 
AAGATTGATG GCTCTGATCT GTTGAACATT CACACCTTTG GCTTTCGGGG CGAGGCGCTG 
CCGAGCCTTG GCGCGGTGGG GCGGCTGGCG ATCACCAGCC GGGCCGAAGG ACATGACGCA 
GCCCAGATCC GCGTGTCAGG CGGCCATATG GAGCCTGTGA GGCCCGCGGC GCTCCGGCAG 
GGTAGCATCG TGGAGCTGCG CGATTTGTTT TTTGCAACAC CTGCGCGGCT CAAGTTCATG 
CGCACCGACC GGGCGGAAAT GCAGGCGATC TCGGACACGG TCAAGCGGCT GGCGATGGCG 
GAGCCTTCAG TGGGCTTCAC CTTGCGCGAT GTCTCAGGTG GCGGAGAGGG CCGCGTGACC 
TTCCGCGCAG ATCCCATGAA CGGCGATCTC TTTGATGCGT TGCACGGTCG GCTGGCGCAT 
GTCATCGGGC GTGAGTTCGC CGAGAACGCC CTGAAAATCG ATGCCACGCG CGAGGGTATC 
CGGCTTTATG GCTATGCGGC CCTGCCGACC TATTCGCGCG GTGCGGCAGT GACGCAGTTC 
CTGTTTGTGA ATGCGCGTCC GGTAAAGGAC AAGATGCTCA CAGGGGCGCT GCGGGCGGCC 
TATATGGATT TCCTCAGCCG GGATCGCCAC CCGGCGGCGG CCCTCTTTAT CGACTGTGAC 
CCGACGCTGG TGGACGTGAA CGTACATCCG GCAAAATCCG AGGTGCGCTT CCGTGATCCG 
GGGCTGGCGC GCGGGCTGAT CGTCTCGGCG CTGCGCCACG CGCTCGCCGA GGCCGGCCAT 
CGTGCCTCCA GCACCGTGGC GGGCGCGACC CTGGGGGCGA TGCGACCGGA ACAGCCGACT 
GCGACAGGGG CGCCGAGGGT GTATCAGATG GACCGGCCGT CCTTGGGCGC ACGGCACAGC 
GCCTATGCGG CGCAGACCCC CGCTCAGCCG CAGGCACCGT CCTATGCTGC GCCGCCTCCC 
TCTGATGCGG TAGGGTTTGC AGAGTTCTCA GGCACTTACA GTGGCCGTCT GGTCGAAGAG 
ACACCTCTTG AGGAGGCTCA GCCCCCCGCC GAGGATCAGC CCCTTGGCGC GGCACGCGGG 
CAGGTGCATG AGAATTATAT CATCGCCCAG ACCCGCGACG GGATGGTGAT CGTCGATCAG 
CACGCCGCCC ATGAACGGCT CGTTTATGAG CGGCTCAAAC GTCAGTTGGC CGAAAATGGC 
GTCGCGACCC AAGGTCTGCT GATCCCAGAA ATCATCGAAC TCTCGGATGG GGATTGTGCG 
CGCCTGCTGG AAGTTGCCGA GGATCTTGCC AGGTTGGGAC TGGGCATTGA GGCCTTTGGC 
GGCAGCGCCG TGGCTGTGCG AGAAACGCCC GCCATTCTGG GCGAGGTCAA TGCCGAGGCT 
ATGATCCGCG ACATTCTGGA TGAGCTGGCG GATCAGGGTG AGAGCCAGCT GGTGCAGGCG 
CGCCTTGAGG CAATCCTGTC GCGGGTGGCC TGTCATGGCT CGATCCGTTC CGGACGGCGC 
ATGCGCGGCG AGGAAATGAA CGCGCTCCTG CGGGAAATGG AACAGACGCC CCATTCCGGC 
CAGTGCAATC ACGGCAGACC CACCTATGTG GAGCTCAAAC TCGCGGATAT CGAGCGCCTC 
TTTGGGCGCA GCTAA 

 

Protein sequence

MATLDPQISE KPPIEAPAKP ARPVIRQLDD GAINRIAAGE VVERPASAVK ELVENAIDAG 
ATRITVEIAD GGKTLIRVID NGCGMTPEDL PLALSRHATS KIDGSDLLNI HTFGFRGEAL 
PSLGAVGRLA ITSRAEGHDA AQIRVSGGHM EPVRPAALRQ GSIVELRDLF FATPARLKFM 
RTDRAEMQAI SDTVKRLAMA EPSVGFTLRD VSGGGEGRVT FRADPMNGDL FDALHGRLAH 
VIGREFAENA LKIDATREGI RLYGYAALPT YSRGAAVTQF LFVNARPVKD KMLTGALRAA 
YMDFLSRDRH PAAALFIDCD PTLVDVNVHP AKSEVRFRDP GLARGLIVSA LRHALAEAGH 
RASSTVAGAT LGAMRPEQPT ATGAPRVYQM DRPSLGARHS AYAAQTPAQP QAPSYAAPPP 
SDAVGFAEFS GTYSGRLVEE TPLEEAQPPA EDQPLGAARG QVHENYIIAQ TRDGMVIVDQ 
HAAHERLVYE RLKRQLAENG VATQGLLIPE IIELSDGDCA RLLEVAEDLA RLGLGIEAFG 
GSAVAVRETP AILGEVNAEA MIRDILDELA DQGESQLVQA RLEAILSRVA CHGSIRSGRR 
MRGEEMNALL REMEQTPHSG QCNHGRPTYV ELKLADIERL FGRS