| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0094 |
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| Symbol | |
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| ID | 4078760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 97110 |
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| End bp | 98543 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005381 |
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| Product | peptidase M16-like |
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| Protein accession | YP_612089 |
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| Protein GI | 99079935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTG AGGCAGCAAT CCTGTCGGGG CTTCGGGCCA GCTGGCGGTC TGCGCTTTGT
GCCGTCGTGA TGGCGACAGG ACTTGGCGCG CCGGGTCTTA TGGCGCAGGA GACGTCCGTG
GATGGGGCAG GGGCCGCGCA AACCTCGCAA AGCGGCGCCG AGATGGTCAC AACCTTCACA
CTTGAAAATG GCATGATGGT GGTCGTGGTC GAAGACCATC GCGCCCCTGT GGTGCAGCAT
ATGGTCTGGT ACCGTGCCGG TTCTGCAGAT GAGCCAGTCG GTCAGAGCGG TGTTGCGCAT
TTTCTCGAAC ATCTGTTGTT CAAAGGGACC GACACGCTGG AGGCGGGCGA GCTTTCGGCG
ACGGTCGCGC GCAATGGCGG GCGCGACAAT GCGTTCACCA GCTATGACTA CACCGCGTAT
TTTCAGCGCG TGGCTGCCGA CCGGCTTGAG CTGATGATGC AGATGGAAGC GGACCGGATG
CGCAATCTGC GCCTCACCGA GACCGACATC GTGACCGAGC GCGAGGTGAT CCTAGAGGAG
CGCAATCAGC GCACCGACAA TGATCCAACG GCCCTGTTTC GAGAGCAGAT GCGCGCGGTG
CAATATCTCA ACCATCGCTA TGGCCAGCCG GTGATTGGCT GGCGGCATGA GATGGAGACC
CTGTCGATGG AGGACGCGCT GTCCTACTAC GGCACATATT ATGCGCCAAA CAATGCCATC
CTTGTGGTGT CGGGCGATGT GCAACCCGAG GCGGTCCGCA AGCTGGCCGA GACCTATTAC
GGCGTGATCC CGGCCAACCC AGATCTGCCC GAGCGGCTGC GCAGCGAGGA GCCCCCCCAA
ACCGCGGCGC GTCGGCTGAC CTTTGCCGAC CCCCGGGTGT CTCAGCCTTA TGTGCAGCGG
TCTTATCTGG CGCCCGAACG TGACAGTGGC AGTCAGGAAA AAGCGGCGGC GCTTTATCTG
CTCTCGCAGC TTCTGGGCGG GGGCAGCACG TCTTATCTCG CCAATGCGCT CCAGTTCGAG
CAGCAGGTGG CGGTTTATAC GGCAGCCTTC TATTCTGGGG TGTCGCTGGA TGACACCACG
TTTGATTTTG TGATTGTGCC TGCCGATGGC GTCACGCTGG ACGAGGCCGA GGCCGCGCTG
GATCGCAGCG TTGCGCAGTT TCTTGAGGCT GGCGTTGATA CCGCACAGCT CGACCGGATC
AAGCTGCAGC TGCGCGCCTC GGAGATTTAT GCCCGCGATG ACGTCGATCG GATTGCCAAC
CGCTATGGTC GCGCGTTGAC CTCCGGGCTG ACGGTTGAGG ACGTGCAGGA CTGGCCACGG
GTGCTGCAAT CCATCACTGA AGACGAGATC ATCGCCGTCG CGCGCGAGGT CTTGCGCCCG
CAAGCCTCGG TCACCGGATA CCTGATCCAA AGCCCGCAGG AGGTCGCCCA ATGA
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| Protein sequence | MTTEAAILSG LRASWRSALC AVVMATGLGA PGLMAQETSV DGAGAAQTSQ SGAEMVTTFT
LENGMMVVVV EDHRAPVVQH MVWYRAGSAD EPVGQSGVAH FLEHLLFKGT DTLEAGELSA
TVARNGGRDN AFTSYDYTAY FQRVAADRLE LMMQMEADRM RNLRLTETDI VTEREVILEE
RNQRTDNDPT ALFREQMRAV QYLNHRYGQP VIGWRHEMET LSMEDALSYY GTYYAPNNAI
LVVSGDVQPE AVRKLAETYY GVIPANPDLP ERLRSEEPPQ TAARRLTFAD PRVSQPYVQR
SYLAPERDSG SQEKAAALYL LSQLLGGGST SYLANALQFE QQVAVYTAAF YSGVSLDDTT
FDFVIVPADG VTLDEAEAAL DRSVAQFLEA GVDTAQLDRI KLQLRASEIY ARDDVDRIAN
RYGRALTSGL TVEDVQDWPR VLQSITEDEI IAVAREVLRP QASVTGYLIQ SPQEVAQ
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