Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0081 |
Symbol | rpsO |
ID | 4078747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 85005 |
End bp | 85274 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638005368 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_612076 |
Protein GI | 99079922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCA CTGCAGAAGA AAAAACACGC CTGATGAAAG AATTCGCGAC CAAAGAGGGC GACACCGGTT CTCCGGAAGT CCAGGTCGCA ATCCTGACCT CGCGCATCAA CACGCTCACC GAGCACTTCA AAACCCACAA AAAAGACAAC CATGGCCGCC GTGGTCTTCT GAAAATGGTT GCTCAGCGCC GTAAGCTGCT GGACTACCTG AAGGGCAAAG AAGAAGCGCG CTATCAGGAC CTGATCAAGA AACTGGGCAT CCGTCGCTAA
|
Protein sequence | MSITAEEKTR LMKEFATKEG DTGSPEVQVA ILTSRINTLT EHFKTHKKDN HGRRGLLKMV AQRRKLLDYL KGKEEARYQD LIKKLGIRR
|
| |