| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0080 |
|---|
| Symbol | |
|---|
| ID | 4075977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 83627 |
|---|
| End bp | 84841 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638005367 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_612075 |
|---|
| Protein GI | 99079921 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC CCCGCCTTCC CGTCACCGTC CTCTCCGGCT TTCTCGGCGC GGGGAAGACC
ACGCTTTTGA ACCGCATCCT GAACAACCGC GAAGGCCGGC GCGTTGCGGT GATTGTGAAC
GATATGAGCG AGGTCAACAT CGACGCGGAT CTGGTGCGCG AGGGCGGCGC TGACCTCAGC
CAGACCGAAG AAACGCTGGT GGAAATGTCC AACGGCTGCA TCTGCTGCAC CCTGCGCGAT
GACCTTCTGG CCGAGGTGCG CCGTCTCGCC GCTGAGAACC GCTTTGACTA CTTGCTGATT
GAGTCCACCG GGATCTCGGA GCCGCTGCCG GTCGCCGCAA CCTTTGATTT TCGCGATGCG
GAGGGCGAGA GCCTCTCGGA TGTGGCGCGT CTGGACACGA TGGTCACGGT GGTCGACGCC
GTGAACCTGC TGAACGATTT TGCCAGTCAC GACCTGCTGG CGGACCGGGG CGAGACGCTG
GGCGAAGAAG ACGAGCGCAC CCTGGTGCAT CTGCTGACCG ACCAAATCGA ATTTGCCGAT
GTGGTTGTGC TTAACAAGGT GAGCCTCGCC AGCGCCGAGC AAGTGGACGC GGCACGCAAG
ATCATTCGCA GCCTCAACGC AGATGCCGAG ATCATCGAGA CCGATTTCAG CGAGGTGTCT
GCCGACAAGA TCCTCGACAC CAAGCTCTTT GATTTTGAAA AGGCGCATGA ACACCCGATG
TGGGCGAAGG AGCTTTATGG CTTTGCCGAT CATGTGCCGG AGACCGAAGA ATACGGCATC
GCGTCCTTTG TCTATCGCGC ACGGGCGCCG TTTGATCCCA GCAAATTGCA CGTGGTGCTG
AACGGCAATC TGCCCGGGGT AATCCGCGCC AAGGGGCATT TCTGGGTTGC GACCCGCCCC
GAGTGGGTGG CGGAATTCTC GCTTGCGGGG GCGCTATCAA GCGTGGCGCC CTTGGGGACA
TGGTGGGCAT CCGTTCCTGC CGAACGCTGG CCCACCCACC AGCAGGCGCG CGACTATATA
CAGACGCATT GGCAGGAGCC CTTTGGCGAT CGCCGTCAGG AATTGGTTTT CATCGGCGCG
GGCATCGACT GGCCCGCCCT GAAGGCCACG CTGGATGCCT GCCTGATCCC CGAAGCAACG
GCCGAGACTC TGCAGGACTA TGCGGATCTG GACGATCCCT TCCCGCTGTG GCGGCGGGCC
GATCAGGCAG CATGA
|
|---|
| Protein sequence | MSDPRLPVTV LSGFLGAGKT TLLNRILNNR EGRRVAVIVN DMSEVNIDAD LVREGGADLS
QTEETLVEMS NGCICCTLRD DLLAEVRRLA AENRFDYLLI ESTGISEPLP VAATFDFRDA
EGESLSDVAR LDTMVTVVDA VNLLNDFASH DLLADRGETL GEEDERTLVH LLTDQIEFAD
VVVLNKVSLA SAEQVDAARK IIRSLNADAE IIETDFSEVS ADKILDTKLF DFEKAHEHPM
WAKELYGFAD HVPETEEYGI ASFVYRARAP FDPSKLHVVL NGNLPGVIRA KGHFWVATRP
EWVAEFSLAG ALSSVAPLGT WWASVPAERW PTHQQARDYI QTHWQEPFGD RRQELVFIGA
GIDWPALKAT LDACLIPEAT AETLQDYADL DDPFPLWRRA DQAA
|
|---|
| |