| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0034 |
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| Symbol | |
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| ID | 4076301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 35895 |
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| End bp | 36665 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005321 |
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| Product | ABC transporter related |
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| Protein accession | YP_612029 |
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| Protein GI | 99079875 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0458238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.202897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAG CCATCGATAT CAAGGGGTTG AACGTCTACT TTGGGGACAG TCACAATCTC
TTTCATGCCG TCAAGAATGC GTCGTTCTCG GTAGATAGCG GCGCGAGCTT TGGCCTTGTG
GGGGAATCAG GGTCCGGCAA GTCCACGATC CTGAAGGCGA TCACCGGCCT TGCGCCCTAT
TGGGAAGGCG AAATGACGGT GGCGGGCCAC CCCCTCGCGG GCAAACGCGA CCGGACCTTC
TATAAGACTG TGCAGATGGT ATTTCAGGAT CCCTATGCCT CGCTGCATCC ACGCCAATCT
GTCGATCAAG TGCTGTCGGA AACGCTGCGT CTGCATGGGT TCAAGGACAT CAACGACCGA
GTGGATCAGC TGCTGAAGGA CGTGGGCCTT GGCCCGGCAT TTCGCTTTCG CTACCCGCAC
CAGCTCTCGG GTGGGCAGCG GCAACGGGTT GCGATCGCGC GTGCGCTTGC GCCGAACCCC
AAGATCCTAC TGCTGGATGA GCCCACATCG GCGCTTGATG TGTCCGTGCA GGCCGAAATC
CTCAATCTCC TGAAGGATCT ACAGGCCGAG CATGACCTCA CCTACGTAAT GGTATCGCAT
GATCTTGCTG TGGTTGCGCA TATGTGCAGT ACGGCTGCGG TGATGCGCAA CGGCGAGATC
ATGGAGATTC TCAGCATCGA CGACATGCGC GCTGGCAAAA CCGCCCATGA TTACACACAG
CACCTTCTGA ATGCTTCGGC CAATCGCGTG GCGAGCGTGG AGACTGCTTA A
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| Protein sequence | MRTAIDIKGL NVYFGDSHNL FHAVKNASFS VDSGASFGLV GESGSGKSTI LKAITGLAPY
WEGEMTVAGH PLAGKRDRTF YKTVQMVFQD PYASLHPRQS VDQVLSETLR LHGFKDINDR
VDQLLKDVGL GPAFRFRYPH QLSGGQRQRV AIARALAPNP KILLLDEPTS ALDVSVQAEI
LNLLKDLQAE HDLTYVMVSH DLAVVAHMCS TAAVMRNGEI MEILSIDDMR AGKTAHDYTQ
HLLNASANRV ASVETA
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