Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0026 |
Symbol | |
ID | 4076293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 26085 |
End bp | 26684 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638005313 |
Product | hypothetical protein |
Protein accession | YP_612021 |
Protein GI | 99079867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0468682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.252109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCT ATTCCCGCGT CGTCTCTTAT CTCAAAGTGG CGCTGCCACT CACGGCCTTG GCGCTCTTGT CGACATTGTT CCTGATCTCA CACAACATCA ATACGGACCC CTCGATCCCG TTTGCCGAGA TCGAACTGGA AAACAGGCTG CGCGGCCAAC AGGTTACTGC ACCGTTTTTC ACCGGCACCA CGGCCACCGG ACAGGAGATC ACGATTGCTG CAACGAAAGC GCTTCCGGGC GGTGATGGCG AAGGGGCTTC GGCAAGTGAT CTCGAGGCAG AAATCCTCAC CACCGAGGGA CGCCGCATCT TATTGCTCTC GGATCGGGGC TCTATTCGAC CGGACCAAGA CCTTGCCGTC CTGGTGGGCA ATGTCCGTAT TATCACGGCA GATGGCACCC GCGTGGAGTC CGAGCGCCTC AACGCAGAGC TCAGTGGACT TCAGGTGGTC AGCCCCGGCC CGGTCACCGC ACAAGGGCCA ATGGGCGATT TTAGCGCCGG GACAATGCGG ATCTTCACGG ATTCGAAGAA CGCCCCGGTA CATATAGAGT TCACGGAAGG CGTAAAGCTG GTGTACGATC CTGCAAAAAT AGAAAGATAA
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Protein sequence | MDRYSRVVSY LKVALPLTAL ALLSTLFLIS HNINTDPSIP FAEIELENRL RGQQVTAPFF TGTTATGQEI TIAATKALPG GDGEGASASD LEAEILTTEG RRILLLSDRG SIRPDQDLAV LVGNVRIITA DGTRVESERL NAELSGLQVV SPGPVTAQGP MGDFSAGTMR IFTDSKNAPV HIEFTEGVKL VYDPAKIER
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