| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0021 |
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| Symbol | |
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| ID | 4078684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 23420 |
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| End bp | 23884 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005308 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_612016 |
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| Protein GI | 99079862 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00251551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.584916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATTT CGAACATCCT CACGCAGGAG GCCGTCCGTG TTATCGGTGC GGCGTCGAGC
AAAAAGCGCC TGTTTCAGGA AGTCGCCGAG GTCGCACAAA CCGCCTATGG CCTGAAGGCA
TCGCTCACCG TTGAGGCATT GCTGGACCGC GAAAGCCTGG GTCCAACTGG CGTTGGCCAT
GGCGTAGCCC TGCCGCACGC TCGGCTGAGT GGCATTGACC GGGTGGTGGG TGTCTATGTC
TCCTTGGAAA AGCCACTGGA TTTCGGTGCC GTTGATCGCC AACCCGTCGA CATCGTTTTT
GCGCTTCTGG CGCCCGTTGA TGCCGGCGTG GAACACTTGA AAGCATTGGC GCTGGTCTCT
CGCACCCTGC GCGAGCAGAG CTTTTGCACC AAGCTGCGCG CAAACCCGGA TACAGCGACC
CTGTACACGA TCCTGACCGA AAGCCAGTCT GTACAGGCGG CCTGA
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| Protein sequence | MQISNILTQE AVRVIGAASS KKRLFQEVAE VAQTAYGLKA SLTVEALLDR ESLGPTGVGH
GVALPHARLS GIDRVVGVYV SLEKPLDFGA VDRQPVDIVF ALLAPVDAGV EHLKALALVS
RTLREQSFCT KLRANPDTAT LYTILTESQS VQAA
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