| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0020 |
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| Symbol | |
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| ID | 4078683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 21907 |
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| End bp | 23346 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005307 |
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| Product | hypothetical protein |
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| Protein accession | YP_612015 |
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| Protein GI | 99079861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0116808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.937022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG ATTTCACATC CTTCGTGGTG CTGGCAGAGA TGCGCACCGG CTCAAACTTT
CTCGAAGCCA ATCTGAATGC TCTTAGAGGC GTGAGCTGTC TGGGAGAGGC GTTTAATCCT
CATTTCATTG GCTATCCAAA CCAAGAGTCC ATCTTCGAGG TTTCCAGAGA AGCACGCGAT
GACGATCCGC ATGCGCTCGT GGACGCGATC CACGCGGCGG AGGGGCTGTG CGGCTTTCGC
TATTTCCATG ACCATGATCC CCGGATCCTT GAAAGGATCC TGAACGACCC GCAGGTTGCC
AAGATCATTC TGACCCGGAA CCCGCTCGAC AGCTATGTAT CGTGGAAGAT CGCTCGGACG
ACCGGGCAGT GGAAGCTGAC CAATGTAAAG CGACGCAAGG AGGCCAAGGC GGTCTTTGAT
GCTGAGGAAT TTGGCGCCCA TGTGGATGGC CTCCAAGAAT TCCAGATCGC CGTCTTGAAC
CAATTGCAAC GCACGGGGCA GACGGCTTTT TATGTCGCTT ATGAGGATCT TCAGAGCCTT
GAGGTCATGA ATGGTTTGGC GACTTGGCTA GGGGTGGATG CGCGGCTTGA TGCGCTGGAC
GACAGTCTAA AACGTCAAAA CCCCGCGCCC GTCATTGCCA AGGTCGAAAA CCCCGAGGAG
ATGACCGAGG CCCTTGCGGG GATGGACCGG TTCAACCTCA CACGCACGCC GAATTTTGAG
CCACGTCGCG GTCCCGCCGT TCCCGGATAC GTTGCGGGAG TGGTGACGCC GATCCTCTAT
ATGCCAGTGC GGAATGGGCT TGAGGCTCAT GTGAGCGAGT GGATCGGGGG GCTCGACAAA
GTCCCGGCCG AAGGGTTGAT CACCGGCATG AACCAAAAGC AGCTTCGCCA GTGGCGTCAT
GCGAATCCGG GGCACCGCAG TTTCACGGTT GTGCGTCACC CATTGGCGCG TGCGCACCAT
GTGTTCTGTA CCAAGATCCT GCCGAATGGG CCCGGAAGCA TGAAGCATAT CCGCAATACG
TTGCGGCGCC AATTTCATCT GGATATTCCG CAAGATGGCA TTGATGTGGG CTATTCTCGC
GAGAGACACC GTCAGGCGTT TGAGCAGTTT TTGACATTTC TCAAGTCCAA CCTTGCGGGT
CAGACCGCGA TCCGGGTGGA TGCACGCTGG GCAAGTCAGG CGCAGAGCAT CAGCGGGTTT
GCTGAGTTGG GTGCGCCGGA TCTGATCCTG CGTGAAGAGG ATCTTGCAAC AGATCTACCG
TGGCTTGCGC GCAAGCTGGG TCGGATGTCT CCGGCGGAGG TTCCCCCTGT GCCCGCGGAT
CAGCCGATCG CACTGGCGGA GATTTACGAT GACGCGCTCG AGGTCCTGTG CCGGTCGATT
TACACCCGCG ACTATTTGAC GTTCGGTTTT GACAGTTGGT CGCCCAGGAT CGAGCGCTAG
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| Protein sequence | MSADFTSFVV LAEMRTGSNF LEANLNALRG VSCLGEAFNP HFIGYPNQES IFEVSREARD
DDPHALVDAI HAAEGLCGFR YFHDHDPRIL ERILNDPQVA KIILTRNPLD SYVSWKIART
TGQWKLTNVK RRKEAKAVFD AEEFGAHVDG LQEFQIAVLN QLQRTGQTAF YVAYEDLQSL
EVMNGLATWL GVDARLDALD DSLKRQNPAP VIAKVENPEE MTEALAGMDR FNLTRTPNFE
PRRGPAVPGY VAGVVTPILY MPVRNGLEAH VSEWIGGLDK VPAEGLITGM NQKQLRQWRH
ANPGHRSFTV VRHPLARAHH VFCTKILPNG PGSMKHIRNT LRRQFHLDIP QDGIDVGYSR
ERHRQAFEQF LTFLKSNLAG QTAIRVDARW ASQAQSISGF AELGAPDLIL REEDLATDLP
WLARKLGRMS PAEVPPVPAD QPIALAEIYD DALEVLCRSI YTRDYLTFGF DSWSPRIER
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