| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0010 |
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| Symbol | dnaK |
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| ID | 4078673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 10577 |
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| End bp | 12505 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005297 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_612005 |
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| Protein GI | 99079851 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0949466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.47597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG TGATCGGGAT TGACCTCGGG ACCACCAACT CCTGCGTTGC CATCATGGAC
GGCTCTCAGC CGCGCGTGAT CGAAAACGCC GAGGGTGCAC GCACCACCCC TTCGATCGTT
GCCTTCACCG ATGAAGAGCG CCTTGTTGGA CAGCCTGCAA AACGCCAGGC CGTGACCAAC
CCGGACAACA CCATCTTTGG TGTGAAGCGC CTCATTGGCC GTCGGTTTGA CGACAGCGAC
CTCGCCAAGG ACAAGAAAAA CCTGCCCTTC GCCGTAATCA ACGGCGGCAA CGGCGACGCA
TGGGTCGAAG CGAAGTCCGA GAAGTACTCC CCCTCCCAGA TTTCCGCCTT CATCCTTGGT
AAGATGAAGG AAACCGCCGA GAGCTATCTT GGCGAAGAAG TGACGCAAGC GGTCATCACC
GTTCCTGCGT ATTTCAACGA CGCCCAGCGT CAGGCCACCA AAGACGCCGG CAAGATCGCT
GGCCTCGAGG TGCTGCGCAT CATCAACGAG CCGACTGCAG CGGCGCTGGC CTATGGCCTC
GACAAGGCCG AAACCCAGAC CATCGCAGTC TATGACCTTG GTGGCGGTAC CTTTGACGTT
ACCATCCTCG AGATCGACGA TGGCCTGTTT GAAGTGAAAT CCACCAACGG TGACACCTTC
CTCGGTGGTG AAGACTTCGA CATGCGCATC GTGAACTACC TCGCGGATGA GTTCAAAAAA
GAGCATGGCG TCGACCTGAC CAAAGACAAG ATGGCGCTTC AGCGTCTGAA AGAAGCGGCA
GAGAAAGCCA AGATCGAGCT GTCGTCCTCT TCGCAGACCG AGATCAACCA GCCGTTCATC
TCGATGGACC CGTCGTCTGG CCAGCCGCTG CACTTGGTCA TCAAACTGAC CCGCGCAAAG
CTCGAAAGCC TCGTGGGCGA CCTGATCAAG AACTCCATGA AGCCCTGCGC CGCCGCGCTG
AAGGATGCTG GCCTGTCCGC GTCCGACATT GACGAGGTGG TTCTGGTCGG TGGTATGACC
CGCATGCCGA AGGTCATCGA AGAGGTGACC AAATTCTTTG GCAAGGAGCC GCACAAGGGT
GTGAACCCGG ACGAAGTGGT TGCCATGGGC GCCGCCATTC AGGCTGGTGT TCTGCAGGGT
GACGTGAAGG ACGTTGTTCT TCTCGACGTG ACCCCGCTGT CGCTCGGCAT CGAAACCCTT
GGTGGCGTCT TCACCCGCCT GATCGACCGC AACACCACGA TCCCGACGAA GAAGTCTCAG
GTCTTCTCCA CCGCCGAGGA CAACCAGAAC GCCGTGACCA TTCGCGTATT CCAGGGTGAA
CGCGAAATGG CAGCCGACAA CAAGATGCTC GGTCAGTTCA ACCTCGAAGA CATCCCGCCC
GCACCGCGCG GCATGCCTCA GATCGAAGTG ACCTTTGACA TCGACGCCAA CGGTATCGTT
TCGGTGTCCG CCAAAGACAA AGGCACTGGC AAAGAGCAGA AGATCACCAT CCAAGCGTCT
GGTGGCCTGT CCGACGAGGA CATCGAAAAG ATGGTCAAGG ACGCCGAGGA CAATGCCGAG
GCTGACAAGG AACGTCGCGA GCTCATCGAA GCACGCAACC AGGCCGAGAG CCTGATCCAC
TCGACCGAGA AATCGATCGA AGATCACGGC GACAAGGTTG ATCCCTCGAC CATCGAGGCG
ATTGAACTGG CGATTGCGGC GCTCAAAGAC GATCTCGAAG GCGACAAGGC GAATGCCGAG
AAGATCAAAT CCGGCATCCA GAACGTCACC GAAGCGGCGA TGCGTCTGGG CGAGGCGATC
TACAAGGCAC AAGCCGAAGA AGGTGGCGCG GACGAGCCCT CTGCCGCTGA TGAAGATGCT
TCCGCAGGCC CCGGTGACGA CGACATCGTT GATGCCGAGT TTGAAGATCT GGACGACAAC
AAGCGCTAA
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| Protein sequence | MSKVIGIDLG TTNSCVAIMD GSQPRVIENA EGARTTPSIV AFTDEERLVG QPAKRQAVTN
PDNTIFGVKR LIGRRFDDSD LAKDKKNLPF AVINGGNGDA WVEAKSEKYS PSQISAFILG
KMKETAESYL GEEVTQAVIT VPAYFNDAQR QATKDAGKIA GLEVLRIINE PTAAALAYGL
DKAETQTIAV YDLGGGTFDV TILEIDDGLF EVKSTNGDTF LGGEDFDMRI VNYLADEFKK
EHGVDLTKDK MALQRLKEAA EKAKIELSSS SQTEINQPFI SMDPSSGQPL HLVIKLTRAK
LESLVGDLIK NSMKPCAAAL KDAGLSASDI DEVVLVGGMT RMPKVIEEVT KFFGKEPHKG
VNPDEVVAMG AAIQAGVLQG DVKDVVLLDV TPLSLGIETL GGVFTRLIDR NTTIPTKKSQ
VFSTAEDNQN AVTIRVFQGE REMAADNKML GQFNLEDIPP APRGMPQIEV TFDIDANGIV
SVSAKDKGTG KEQKITIQAS GGLSDEDIEK MVKDAEDNAE ADKERRELIE ARNQAESLIH
STEKSIEDHG DKVDPSTIEA IELAIAALKD DLEGDKANAE KIKSGIQNVT EAAMRLGEAI
YKAQAEEGGA DEPSAADEDA SAGPGDDDIV DAEFEDLDDN KR
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