| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0009 |
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| Symbol | |
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| ID | 4078672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 9343 |
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| End bp | 10500 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005296 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_612004 |
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| Protein GI | 99079850 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.111301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.420698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAC GTGACTATTA CGAGGTGCTC GGTGTCTCTA AGGGGGCCAG CGCCGACGAA
ATCAAAAAGG GCTTTCGCAA GAAGGCCAAA GAGCTGCACC CGGATCGCAA TGCGGACAAC
CCGGACGCAG AAGCCCAGTT CAAAGAAGCC AATGAGGCCT ATGACGTTCT GAAAGATCCG
GAACGCAAGG CAGCCTATGA TCGCTATGGT CATGCCGCCT TTGAAAACGG CATGGGTGGC
GGAGGCGGTG GACGCGCAGG CGGTCACCCT GGAGGGGACT TCTCCTCTGC CTTTTCGGAT
GTCTTTGACG ACCTCTTTGG CGACTTCATG GGCGGAGGAG GCGGGCGCGC GGGCGCGCGC
CAGCGCGCAA CTCGCGGCGC GGACCTGCGC TACAACCTGC GCCTGTCGCT TGAGGAAGCC
TTTGCCGGCC TTCACAAGAC CATCAACGTG CCCACCTCCG TAAGTTGCAC CTCCTGTGAG
GGTACAGGTG CCGAGGGCGG CGCAGAGCCA ACAACCTGCC CGACCTGTTC GGGGATGGGG
AAGGTCCGCG CGCAGCAGGG CTTCTTTACG GTGGAACGGA CCTGCCCGAC CTGTTCGGGT
CTGGGCCAGA TGATCAAAAA CCCCTGCAAG ACCTGTAACG GCCATGGCCG CGTGGAAAAA
GATCGCTCGC TCTCGGTGAA CATTCCTGCA GGTGTTGAAA CCGGCACCCG CATCCGTCTC
GCTGGCGAAG GCGAGGCAGG CCTGCGTGGT GGACCTCCGG GCGATCTCTA CATCTTTATC
GAGGTCGCAC GCCACGAACT CTTTGAGCGC GAAGGCAACA ACCTTCACTG CCGGGTTCCT
GTCTCCATGG CCAAGGCGGC GCTGGGCGGC GCCATCGAGG TGCCCACCAT CGATGGTGGT
CGCGGGCGTG TCCAGATCCC CGAAGGCAGC CAGTCGGGCC GCCAGATGCG CCTACGAGGC
AAAGGCATGC CTGCGCTGCG TGGCGGTGGG ACCGGTGACA TGTTCATCGA ACTTGCGGTG
GAGACACCTG TCAACCTGAC GCCGCGCCAG AAGGAGATCC TGAAGGAGTT TGACGAGATT
TCAGAGGAAA ACACCAACCC TGAAACGCGC AGCTTTTTCT CCTCGGTCAA GAGCTTCTGG
GACGGAATGA AAGGGTGA
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| Protein sequence | MSKRDYYEVL GVSKGASADE IKKGFRKKAK ELHPDRNADN PDAEAQFKEA NEAYDVLKDP
ERKAAYDRYG HAAFENGMGG GGGGRAGGHP GGDFSSAFSD VFDDLFGDFM GGGGGRAGAR
QRATRGADLR YNLRLSLEEA FAGLHKTINV PTSVSCTSCE GTGAEGGAEP TTCPTCSGMG
KVRAQQGFFT VERTCPTCSG LGQMIKNPCK TCNGHGRVEK DRSLSVNIPA GVETGTRIRL
AGEGEAGLRG GPPGDLYIFI EVARHELFER EGNNLHCRVP VSMAKAALGG AIEVPTIDGG
RGRVQIPEGS QSGRQMRLRG KGMPALRGGG TGDMFIELAV ETPVNLTPRQ KEILKEFDEI
SEENTNPETR SFFSSVKSFW DGMKG
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