Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2825 |
Symbol | |
ID | 8829237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013930 |
Strand | + |
Start bp | 180416 |
End bp | 181270 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_003494777 |
Protein GI | 290243107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAT TCATGCACTC GCGGGTGCTA AATCGAGCGC TCGCGCTATC TGTGCTTGCG CTGGTGCCAG CTCTGGCTCT GAGCGTTCAA TCGGCCACCG CGTCGGATAT GTCGGCGTCC GCGGAGCCGT ACACATTCCC GCAAGAAACC CGTCTGGTGA AATTTCGCTA CGACGAGAAC CGCACGTACG AAATCCTCGC TCGCCCGGAT GCGCCAACCA ACATCGCTCT GGGGGAAAAC GAAGAGCTTG TTGCGTTGGC GATCGGCGAT ACGGTTCAGT GGATCACGGA AGATGTGCCA GGGAACATCT TCATCAAGCC CGTCCGTTCC GGTATCTATA CCGCCGGCAC GATCGTTACC AACAAGCGTT CCTACCAGAT CAGCCTCCGT GCGGTACCGT CCAATGGGCA GTGGTATCAG CGTGTTTCAT GGGAGCACGG ATCGGATGGA ATGGTCCGTG AAGCGCGCGG TGGTGGCGAG TCATTTCAGA CTTCGGTCGG TGCTGCCCCT CAAGAGCAGG CGGGCGGGCA ACAGGTAGGC CCTGTTCCAG GACTGGATGA TCGGGTCTCT CAAGCATCGA CGTCTTCGAG CCCCCGGCCG TCGGATCTAA ATTTTGGCTA TGAAGTCCGG GGTGCCTCCG GGATTGTTCA GAGCGCATTC GATGATGGTC GATCCCTCTG GATCCGGATG GAGGACGGAC TCGAGGAGCT TCCGGCGGTG TTCGTGCAGG GCCGGTCGAC AAGCAAGGCA CTGGCGAACT ACCACGTTGA TGGCGATTAC ATCGTGGTTC ATCAAGTGAG CAGCCGGACA ACGCTGCGTA TTGGGCAGGA CGAAGTGGTG ATCGAGAAGG GGTAG
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Protein sequence | MKGFMHSRVL NRALALSVLA LVPALALSVQ SATASDMSAS AEPYTFPQET RLVKFRYDEN RTYEILARPD APTNIALGEN EELVALAIGD TVQWITEDVP GNIFIKPVRS GIYTAGTIVT NKRSYQISLR AVPSNGQWYQ RVSWEHGSDG MVREARGGGE SFQTSVGAAP QEQAGGQQVG PVPGLDDRVS QASTSSSPRP SDLNFGYEVR GASGIVQSAF DDGRSLWIRM EDGLEELPAV FVQGRSTSKA LANYHVDGDY IVVHQVSSRT TLRIGQDEVV IEKG
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