Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2636 |
Symbol | |
ID | 8829048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013930 |
Strand | + |
Start bp | 17466 |
End bp | 18269 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003494590 |
Protein GI | 290242920 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.539147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAAGA TCAACGAAGT CGTCACCCTC GCCTGCCACA CGGCGTCTGG AGACCCGAGC GTCTACACCT ACTCAACTGC GGTCGAGGCA GCCGAACGCG CAAAGGGGGT GCATATCGAA CGGGCCCGCA ATGCCGCCCT GAAGGCAGGC TATCAGGAGC CGATGGTGGC TTTTGACCGA GATCACCAAT CGGAGCTGTC GAGCGGTGTC GAGGAAACCG GGCGCAAGGT TCAGCGCACC ACCGATGCGA CACGGTTCGC CCTGCTGGCG GTCACCGACT CCGTCCGGGA CGAGGTGCAG TTCGAGGTAT CCTGTATTCG CGGCGCAAAG GACATGCACA CCGCGGCGGA GGTGGCGCTG GTGATGCGCA AACCGGATCA GATGATGGAT GCGTTTGTCC GTGGGGGTCT GCGGGTCGAC GTCGCGCCGC CGGAAATGCA GGCGCTTTTC GTGGCCGCCA GTCGCGTACA GGCCTGCGGT CATCTGGACG GGCTCGTCGC GCTGCAAGAG GCGGAGAAGC AACCCTCGCT CTCGGAGGCG TTCGAGGCGA TCTGGGAACA GGGTGGCGTG CGCATGAGCG ATGGATCGAT TCACGGTGAG GTGGGTCACC TCGCCTACGT GGCGATTGAC GAGGACGACG GCGGCGCGAT CAGCGATGCG CCGCGATTCT GGCGTCGGGC CATCAAGCTG GCGTACGGCG TGATGATCGA GGAACGAGAG GAAGGTTTCG GGCGCCCGCG AGAGGAAGAT CTGTTGGGGC CCGGCTACTT CAAGCCCCGC GGTCCGGAGG CGGTGGCCGC ATAG
|
Protein sequence | MSKINEVVTL ACHTASGDPS VYTYSTAVEA AERAKGVHIE RARNAALKAG YQEPMVAFDR DHQSELSSGV EETGRKVQRT TDATRFALLA VTDSVRDEVQ FEVSCIRGAK DMHTAAEVAL VMRKPDQMMD AFVRGGLRVD VAPPEMQALF VAASRVQACG HLDGLVALQE AEKQPSLSEA FEAIWEQGGV RMSDGSIHGE VGHLAYVAID EDDGGAISDA PRFWRRAIKL AYGVMIEERE EGFGRPREED LLGPGYFKPR GPEAVAA
|
| |