| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2528 |
|---|
| Symbol | |
|---|
| ID | 8808312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2660844 |
|---|
| End bp | 2662094 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
|---|
| Protein accession | YP_003461754 |
|---|
| Protein GI | 289209688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0397628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG AGGTGTCCAT GACCTCTGCC CCCCGTCATG CGGCGATGGC AGCCTTCGAG
GTGCGCGACC ACTCGCTGTT GATCGGCGGT ATCCCGCTGG CCGAGATCGC TCGCCGCGCG
GGCCGGACCC CGTTCTATGC CTATGACCGA CAGGTCATGA CGCGCCGCGT CCAGGCCCTG
CGTCAGGCCC TGCCCCGGGA TCTGTCGATC CACTACGCGA TCAAGGCGAA CCCGATGCCG
GCGGTTGTGG GCCATATGGC CTCGCTGGTC GATGGCCTGG ATGTCGCCTC CGGGCGCGAA
CTGCAGATTG CCCTGGACGC CGGGGTGTCC GCGGCCGATA TCAGCTTCGC CGGGCCGGGC
AAGTCCCCGG CCGAGCTGGA GATGGCGGTA GCGGCGGGGA TCACGATCCA CCTCGAATCC
GATACCGAAC TGACGCGGGT CGCGGCGATC GCCGAACGCA CCGGCAGGAC GCCTTGCGTC
GCGGTGCGCG TGAACCCCGA CTTCGAGCTG AAGACCTCGG GCATGAAGAT GAGTGGCGGG
CCCAAGGTGT TTGGCGTGGA TGCCGAGCGC GTGCCCGAGA TGCTGGGGCG TATTGGCGAG
CTGGGGCTGC ACTTTCGCGG CTTTCACATC TTTGCCGGCT CGCAGAACCT GCGCGCCGAG
TCGCTGGTGG AGGCCCAGGG CCTGACCCTG GACCTGGCAT TACGCCTGGC CGACCATGCT
CCGGGGTCGG TGGAGACACT GAACATCGGG GGCGGTTTCG GCATCCCCTA TTTCCCGGGC
GATCAACCGC TGACCCTGGG CCCCATCGCG GAGCAGCTCG AGCGGCGTCT GCCAGAGGTT
CGCGCGCGGA TGCCGCAGGC CGAGGTCATC CTCGAGCTGG GTCGCTACCT GGTGGGGGAG
GCGGGCGTAT ACGTCGCCGA GGTGCTGGAC CGCAAGGTCT CGCGCGGCCG GGTATTCCTC
GTCACCAACG GGGGCCTTCA TCACCATCTG GCGGCCTCGG GCAACTTTGG CCAGGTGATC
CGCAAGAACT ACCCGGTCGC CATCGGCAAC CGCATGGGGG AGGCCGCCAG TGAAGTCGTC
GACATCGTCG GGCCGCTGTG CACCCCGCTG GACGTTCTGG GTCAGCAGGT GGAGCTGCCC
CGCGCGGAGA TTGGCGATCT GGTCGTGGTC TTCCAGTCCG GGGCCTATGG CTACACGGCC
AGCCCCAGGG GCTTCCTCAG CCACCCGGAG CCCGCGGAAA TCCTCGTCTG A
|
|---|
| Protein sequence | MNREVSMTSA PRHAAMAAFE VRDHSLLIGG IPLAEIARRA GRTPFYAYDR QVMTRRVQAL
RQALPRDLSI HYAIKANPMP AVVGHMASLV DGLDVASGRE LQIALDAGVS AADISFAGPG
KSPAELEMAV AAGITIHLES DTELTRVAAI AERTGRTPCV AVRVNPDFEL KTSGMKMSGG
PKVFGVDAER VPEMLGRIGE LGLHFRGFHI FAGSQNLRAE SLVEAQGLTL DLALRLADHA
PGSVETLNIG GGFGIPYFPG DQPLTLGPIA EQLERRLPEV RARMPQAEVI LELGRYLVGE
AGVYVAEVLD RKVSRGRVFL VTNGGLHHHL AASGNFGQVI RKNYPVAIGN RMGEAASEVV
DIVGPLCTPL DVLGQQVELP RAEIGDLVVV FQSGAYGYTA SPRGFLSHPE PAEILV
|
|---|
| |