| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2457 |
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| Symbol | |
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| ID | 8808238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2584644 |
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| End bp | 2585993 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003461683 |
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| Protein GI | 289209617 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGT CCGCCAAACG TATCTTCTCC ACGCTGGCTA CCGCCGGCAT TGCCCTGCTG
GTGGCAAGCC CTGCCCCCGC CGCCAGTCTG CTTGAGGTCT ATGAGCGCGC TGCCACGGAA
GACGCCGAGC TGCGCGCCGC CGAGGCCGAA TACCGCAGTG TCCTGGAACG CCGTCCGATT
GCCCGTTCCG CGTTCCTGCC GCAGATCACC GGCGAGGCCG AGGCCGGCGC GTTCTATAAC
GACTATCGCG ACCAGGACAG CTTCGACGGA CGCCAGACCA GCTTTGGCGT ATCCCTGGTG
CAGAGCCTCT ATGACCGGCG CAACTTCATC GAACTGACCC AGGCGGATCT CGAGATCGCG
CGCGCCGAGG CGGAGCTGGA CGCAGCCCGC CAGGACCTGA TCCTGCGTGT ATCCGAGGCC
TACTTCGACG TGCTGATCGC GCAGGAGACG CTGGCCTTTC GCGAGTCGGA ACTCGATGCC
ATCGGTCGCC AGCTGGAACA AACGGAGCGT CGCTTCGAGG TCGGCCTGAT CGCCAGCACG
GACGTCAAGG AAGCCCAGGC ACAGCGCGAC CTCGCCGAGG CCGAACGGAT TGCCGCCGAG
AATCAGCTGG ACGTGGCCCG CGAGCAGCTC GCGGTGATCA CCAACACCTA CTGGGACGAG
CTCGACATCC TGCGCGAGGA CGCCGAACTG ACCCCGCCGG ACCCGGCCGA CCCACAGGCA
TGGGTGGATA TCGCGCTGGA GAACAATCTG GAGCTGGCCG CCCAGCGCCT GACCACCGAG
ACCGCCCGCG AACAGATTCA GCGCCAGCGC GCCGAGGGGC ACCCGCGACT GAACCTGAAC
GCCTCGGTCA GCGAAAACCG TTTCCACGGC ATCGATGACG GCGGCACCCA GCAGGGAGTG
GGCCCCTTCT TCAACGAGGG GACCGAGGCC CAGGTGGGCG TGCGCCTGGA GGTTCCGTTC
TACACCGGCG GGCGCGTGAG CGCGCTCACC CGGCAGGCGC GCGAGGACTT CCAGGCCGCG
CAGGAAGGGC AGTCGCTCGT TGAACGCCGC ACCACCCAGG ACACCCGCAA CGCCTACCTG
TCGGTCATCG CGAACAGCTC GCGCGTGCGC GCCCTGGAGC AGGCGCTGAT CTCCACCCAG
GCCGCATTCG AGTCGGCCGA GGCCGGATTC GAAGTCGGCA CGCGTACCCA GGTCGACGTC
CTGCTGGCCT TGCGCGAGGT GTTCCGCGCC GAGCGCGACT ACGCCGAGGC CCGCTACGGC
TTCCTGACCG ACTCGCTGCG CCTGCAACGC GCCGCCGGCC GCCTGAGTGT CGCGGACCTG
GAATCGATCG ACCAGCTGCT GGAGCAATGA
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| Protein sequence | MNRSAKRIFS TLATAGIALL VASPAPAASL LEVYERAATE DAELRAAEAE YRSVLERRPI
ARSAFLPQIT GEAEAGAFYN DYRDQDSFDG RQTSFGVSLV QSLYDRRNFI ELTQADLEIA
RAEAELDAAR QDLILRVSEA YFDVLIAQET LAFRESELDA IGRQLEQTER RFEVGLIAST
DVKEAQAQRD LAEAERIAAE NQLDVAREQL AVITNTYWDE LDILREDAEL TPPDPADPQA
WVDIALENNL ELAAQRLTTE TAREQIQRQR AEGHPRLNLN ASVSENRFHG IDDGGTQQGV
GPFFNEGTEA QVGVRLEVPF YTGGRVSALT RQAREDFQAA QEGQSLVERR TTQDTRNAYL
SVIANSSRVR ALEQALISTQ AAFESAEAGF EVGTRTQVDV LLALREVFRA ERDYAEARYG
FLTDSLRLQR AAGRLSVADL ESIDQLLEQ
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