Gene TK90_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2449 
Symbol 
ID8808230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2571311 
End bp2572585 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID 
ProductCRISPR-associated protein, Csy1 family 
Protein accessionYP_003461675 
Protein GI289209609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TGGAGGTCAA AGCGCTCCGA ACTCTGATCG AGAGATTCCT GAATGAGCGT 
CTGCAGACCA AGATCGAGAA ACTACAACCG GACGACCCGA AACGGGACGA GCTACAGCAA
CACCACCTGC GCGAGAACTG GGTGGCTGAT GCCGCACGCC GGGTCGGCCA GTTGCAGATC
GTCACGCACA GCCTCAAGCC GGTTCATCCG GACGCCAAAG GCACCAACCT CTACCGGCCA
CCGCACAAGA TTCCGGATCA TCCCGAGATC GGCAGCCATC TGCTGGGAAA CGATTTCGAC
GAAGACGTCG TCGGTAATGC CGCCGCCCTC GACGTGTACA AGTTCCTCAA GCTCGAGCAC
GAAGGCAGAA CGCTGCTAAG CCGCGCATTG GAGGGGAATG AGGAGCTGGC TGTCGCCTTC
AGCGACGACC AGGACCAGGG CCGCGAATGG ATGCGGGCCT TCGCTGCCAT CGCCCGGCCC
CGTGACACGG AGGCCTCCCA CACCCTCGCC AAACAGGTTT TCTGGCTGGT CGGAGAGGAC
CCCACCAGAA ACCAGGACTA CCACCTTCTG GCCCCCCTGT ACGCGACATC CCTCGCCCAT
CGGGTGTACC AGACCATCAA TGAGCACCGG TTCTCGGACG AAGCCAAAGC CGCGCGCAAG
GCTCGGCGCG AACGCGCATA CAGCGACAGG GGCTACCATG AATACCCGCG CCTGGCCGTA
CAGAAACTCG GTGGCACCAA ACCGCAGAAC ATCTCCCAGC TCAACAGCGA GCGTCGCGGG
CAGAACTATC TGCTCGCCTC CCTGCCGCCC AACTGGATCA GCCGCGATGT GCGCCCGCCA
CTGCATGTCG AGTCCGTGTT CCCCCGACTG TTCGGCAGAC GGCGCGGAGC CCGCGACACC
TCCAGAGAAC TCCAGCGCTT TCTGGCCACG GACCCACCGG CCAATGCCGA CACGCGCCAC
AAACGCGACC AATACCTCGA GACGCTGATC GACGAACTGC TGCTGTTCGC CTCCGAGCTG
CACTCCCTGG ACCCCGGGTG GAGCGCGTCA CCGGAGTGCC GGCTGAACCG TGCCGAGACG
CTATGGCTGG ACCCGTGGCG CGGCGAAATC GACGAAGACT TCGCGCAGTG GCGCGCAAGC
GATGAATGGG TCGAGGAAGT CAGCCACCGC TTCGGTAACT GGGTAAACGC ACAACTGGAC
CGGCAGTTGC CCGTGGGCGA CCCCGAACAC CGCCACTGGA TGGACTCCCT GCGCGAGGTA
CTTTCCCATG CTTGA
 
Protein sequence
MENVEVKALR TLIERFLNER LQTKIEKLQP DDPKRDELQQ HHLRENWVAD AARRVGQLQI 
VTHSLKPVHP DAKGTNLYRP PHKIPDHPEI GSHLLGNDFD EDVVGNAAAL DVYKFLKLEH
EGRTLLSRAL EGNEELAVAF SDDQDQGREW MRAFAAIARP RDTEASHTLA KQVFWLVGED
PTRNQDYHLL APLYATSLAH RVYQTINEHR FSDEAKAARK ARRERAYSDR GYHEYPRLAV
QKLGGTKPQN ISQLNSERRG QNYLLASLPP NWISRDVRPP LHVESVFPRL FGRRRGARDT
SRELQRFLAT DPPANADTRH KRDQYLETLI DELLLFASEL HSLDPGWSAS PECRLNRAET
LWLDPWRGEI DEDFAQWRAS DEWVEEVSHR FGNWVNAQLD RQLPVGDPEH RHWMDSLREV
LSHA