Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2382 |
Symbol | |
ID | 8808163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2500670 |
End bp | 2502031 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_003461608 |
Protein GI | 289209542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00199073 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.128025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAAAA GCAACACCCC GTCTCCCGAC AACGTGCAGC GCGTGGGCTT TGTCAGCCTC GGCTGCCCAA AGGCCCTGGT CGACTCCGAG CAGATCCTGA CGCGCCTGCG CGCCGAGGGT TACGAGATCG CCGCCGACTA CGACGGCGCG GACCTGGTGG TGGTCAATAC CTGCGGCTTT ATCGACGATG CGGTGGCCGA ATCCCTGGAC GCGATCGGCG AGGCCATGGA TGCCAATGGC CGAGTCATCG TGACCGGCTG CCTGGGCAAG GACGCGGAGC GCATCCACGA GACCCACCCG GGCGTGCTCG CGGTCACCGG CCCGCATGCC TTTGATGAAG TCGTGGGCGC GGTGCACGAG CACCTGCCGC CGCCGGCGAC TCCGTTCGAG TCGCTGGTGC CACCGCAAGG TATCCGCCTG ACCCCGCGCC ACTATGCCTA CCTGAAGATC TCCGAGGGCT GCAACCACCG TTGCAGCTTC TGCATCATCC CGAGCCTGCG CGGCGACCTG GTCAGCCGCC CGATCGGCGA GGTGCTGGCC GAGGCGGAGC GCCTGGCCGC GGCCGGCGTG CGCGAGATCC TGGTGATCTC GCAGGACACC TCGGCCTATG GCGTGGACGT GAAATACCGC ACCGGTTTCC ATGGCGGACG CCCGATCCGC TCCGACATCG CCCACCTGGC CGAGGCACTG GGCCAGCTCG GCATCTGGGT GCGTCTGCAC TACGTCTACC CCTACCCTCA CGTGGATCGA CTGATCCCTC TGATGGGCTC GGGCGAGGAT GGCGGGATCC TGCCGTATCT GGACATGCCG CTGCAGCATG GCCACCCCCG GGTACTCAAG GCGATGCGCC GCCCGGCCGC CGCCGAGCGC GTGCTGGAAC GCATTGCGAA GTGGCGCGAG CAAGTCCCCG ACCTGACCCT GCGCTCGACG TTTATCGTGG GCTTTCCGGG GGAGACCGAG GCCGAGTTCG AGACGTTGCT GGAGTTTCTG CACGAGGCGC AGCTCGACCG CGTCGGCGCC TTCGCCTACT CGCCTGTGGA GGGTGCGGCC GCGAACGAAC TGGCGGACCC GGTACCGGAG GCCGTGCGCG AAGAACGTCT GGCGCGCTTC ATGGACGTGC AGGCCCGGAT CAGCGCCGAC CGGCTGCGCC GCCGGATCGG CAGCCAGCCG GTGGTGCTGG TCGACGAGGT GCACGCGGAC GGGACCGTGA TTGCCCGGTC CGCCGCGGAG GCTCCGGAGA TCGACGGCGT AATCCGCGTG GCCGGGATCG ACCCGACATC GGTGGATATC GGGGACTTCA TCGAGGTCGC GATCACGGAC ACCGACGAGC ACGACCTGAT CGCCGAACTG GCAGACGACT AA
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Protein sequence | MNKSNTPSPD NVQRVGFVSL GCPKALVDSE QILTRLRAEG YEIAADYDGA DLVVVNTCGF IDDAVAESLD AIGEAMDANG RVIVTGCLGK DAERIHETHP GVLAVTGPHA FDEVVGAVHE HLPPPATPFE SLVPPQGIRL TPRHYAYLKI SEGCNHRCSF CIIPSLRGDL VSRPIGEVLA EAERLAAAGV REILVISQDT SAYGVDVKYR TGFHGGRPIR SDIAHLAEAL GQLGIWVRLH YVYPYPHVDR LIPLMGSGED GGILPYLDMP LQHGHPRVLK AMRRPAAAER VLERIAKWRE QVPDLTLRST FIVGFPGETE AEFETLLEFL HEAQLDRVGA FAYSPVEGAA ANELADPVPE AVREERLARF MDVQARISAD RLRRRIGSQP VVLVDEVHAD GTVIARSAAE APEIDGVIRV AGIDPTSVDI GDFIEVAITD TDEHDLIAEL ADD
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