| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2278 |
|---|
| Symbol | |
|---|
| ID | 8808058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2399991 |
|---|
| End bp | 2400584 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | SUA5/yciO/yrdC domain protein |
|---|
| Protein accession | YP_003461504 |
|---|
| Protein GI | 289209438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.940208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0280741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCGA ATAGCCAACC GCTGCTAACC CCCGAGATCG AGCCCGTCGC GCAGTGCGTG
CGCGACGGCG GCGTGGTCGC CTACCCCACC GAGGCGGTCT TCGGCCTTGG CTGCCGCCCG
GATGACCCCC GGACGATCGA TCGCATCCTC GAGATCAAGG GCCGCCCGGC CACCAAGGGA
CTGATTGTGG TCACCGACCG GCTGGATCGC CTCGCGCCCT GGCTGGCGCC GCTACCGGCC
GAACGCCGGG CCGAGATCGA CGCCAGCTGG CCTGGGCCGA CCACCTGGCT GCTACCCGTC
ACCGATGCCT GCCCGCCGCT GCTGCGCGGC GAACACGACA GCCTCGCGGT ACGCGTCACC
GCCCACCCGG AGACGCGCGC GCTGTGCGCG GCCGCGGGCA GCCCCCTGGT CTCCACCAGC
GCCAACCGCG CGGGCATAGA GCCCTGCCGC ACCTGGGACT GCGTGAACAC GCAGCTCGGG
GCGGGCATCG ACGCGATCCT GCAGGCAGAA TGTGGCGGGC GCACCGCACC CAGCACGATC
CGCGATGCCC GCACCGGGGC CTGGCTCCGG GGCGCGCCGG ATACCCACGA ATAA
|
|---|
| Protein sequence | MDPNSQPLLT PEIEPVAQCV RDGGVVAYPT EAVFGLGCRP DDPRTIDRIL EIKGRPATKG
LIVVTDRLDR LAPWLAPLPA ERRAEIDASW PGPTTWLLPV TDACPPLLRG EHDSLAVRVT
AHPETRALCA AAGSPLVSTS ANRAGIEPCR TWDCVNTQLG AGIDAILQAE CGGRTAPSTI
RDARTGAWLR GAPDTHE
|
|---|
| |