| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2276 |
|---|
| Symbol | |
|---|
| ID | 8808056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2396813 |
|---|
| End bp | 2397298 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF494 |
|---|
| Protein accession | YP_003461502 |
|---|
| Protein GI | 289209436 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.00580971 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA GCGTGCTGGA TGTGCTCATG TACCTGTTCG AGCACACCAT GGACGAGGAA
TCCGACGAGG AGCCGGATCG CGCGGAACTG GAACGCCACC TGGTGGAGGC CGGTTTCGCC
CGCCCCGAGA TCGACCGCGC CCTGGGCTGG CTGGATCGCC TGATGAGCGA GGCCCCCCTC
ACCGGTCGCG GCGGCGACAG CGCGGCCCAG CGCATCTATG CCCCGGAAGA GCGCAAGCGC
CTGGACACCG AGGCGCACGG CTTCCTGCTG CACCTGGAGC AAAACGGGCT GCTGACCGCC
GGCACCCGCG AGCTGGTACT GGACCGCGTG ATGGAACTGG ACGCCGAGGA GATCGACCTC
GACCAGCTGC GCTGGGTGGT GCTGATGGTG CTGTTCAACC AGCCCGACGA TGCGATCGCC
TATTCCCGCC TGGAAGAGGT GATGCGCGAC GATGCCGGCC CGTCGGCCGT GGATTATCTG
CACTGA
|
|---|
| Protein sequence | MNESVLDVLM YLFEHTMDEE SDEEPDRAEL ERHLVEAGFA RPEIDRALGW LDRLMSEAPL
TGRGGDSAAQ RIYAPEERKR LDTEAHGFLL HLEQNGLLTA GTRELVLDRV MELDAEEIDL
DQLRWVVLMV LFNQPDDAIA YSRLEEVMRD DAGPSAVDYL H
|
|---|
| |