Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2206 |
Symbol | |
ID | 8807985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2323481 |
End bp | 2324998 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003461432 |
Protein GI | 289209366 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.288371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.214484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGG CGAATACGGT CCAGACCGTC GCGACACTGG GCCGCCTGTG GCCCGCCGGG GCGCCAGCGC TGCCGAGCGA GGTCGCCGGG CAGCGTGTCA CCGACCTTGC CCAGGACAGC CGCCGGGTGA CCCCGGGTGC CGTCTTCGTG GCCCTGCGCG GGACCCAGGG CCACGGCCTT GCCCATGCGC GGGCCGCGGC CGAGCAGGGG GCTGTGGCCA TCCTGTGGGA CGAGGCCGAG GCGGCCCCCG CCCTGAGCAT CCCGGTGCTG CATCTCCCGG GCCTGCGCGT CGCGCTGCCG GCGATCTGTG ACGCCCTGTG GGGTGCCTGG CCGGCCGATT ATCCCGTCGT CGCGGTGACC GGTACTGATG GCAAGACCTC GGTCAGCCAG TTGTTCGCCG GCGCCCTGGA GCAGCTCGGT GTCCCCACAG GGGTGGTCGG GACGCTGGGC ACGGGCCGCT TTGGGGCGCT GGAAGATTGT GGCCACACGA CCCCGGGCGT GATCGACCTG CATCGACACC TCGCGCATTT GACCGCCGAC GGCTGCCGGG CGCTCTCGAT CGAGGCCTCG TCCCACGGCC TCGAACAGGG GCGGATGGCC GGGTTGCCGG TGCGCGTCGC CGTGCTGACC CGGCTGGGTT CGGACCATCT GGATTTTCAT GGCAGCCAGC AGGCCTATGC CGACGCCAAG GCGCGGCTGT TCGCCTGGCC GGGGCTGGAG ACCGCGGTGC TCAATGCCGA CGACGCCCTC GGGCAGCGCC TGATCCGTGA AACCACGGCT GAACACATCC TCACCTACAG TGCCGTCGGG GCCTCCGCCG ACCTGGTCGC GCGGGAGGTC GAGGCAGGCT CCGACGGCAT TCGCTTCACG CTGGAGGTGG CCGGCGAGGC CTGGCCGGTG CAAGCGGCCC TGTTCGGGCT GTTCCAGGTC GGCAATCTGC TGGCGACGCT CGCCGCCCTG CGGGCGCTGG GTCATTCCTG GCCGGCCGCC GTCGATGCGG TGTCGCGCCT GCGCGGTGTC CCGGGGCGCA TGGAGCGCTT CGAACTGCCC AGTGGGGCAT TGCTGGTCGT GGACTATGCC CACACCGAAC AGGCGCTGGC CGCGGCGCTG GATGCCTTGC GCCCGCACAC GGCCGGCCGC CTGATCGCAG TCTTTGGCTG TGGTGGAGAC CGCGATGTCA CCAAGCGTCC GGCCATGGGG CGGGCCGCCA GTGCGCGCGC CGACCAGGTG ATCGTGACGG ACGACAACCC GCGTTCCGAA GACCCGGCCG CGATCCGCGC CGCCGTACTC GCCGGCTGTG ACCGGCCCGA GGCCTGCCGC GAGCTGGGCG ATCGGGAGGC GGCGGTGCGC GCGGCGGTGG CCGAGGCGGG CCCGGGCGAC GTCATCCTGC TGGCGGGCAA GGGGCACGAG ACCACTCAGC AGGTGGGTAC GCAGTTTTAT CCGTTCAGTG ATCGCGAGCT GGCGTTAGCG CTCGCCGCTC GGACGAATGC GGGAGACAGT GGGGGGGGTA TCCAATGA
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Protein sequence | MMAANTVQTV ATLGRLWPAG APALPSEVAG QRVTDLAQDS RRVTPGAVFV ALRGTQGHGL AHARAAAEQG AVAILWDEAE AAPALSIPVL HLPGLRVALP AICDALWGAW PADYPVVAVT GTDGKTSVSQ LFAGALEQLG VPTGVVGTLG TGRFGALEDC GHTTPGVIDL HRHLAHLTAD GCRALSIEAS SHGLEQGRMA GLPVRVAVLT RLGSDHLDFH GSQQAYADAK ARLFAWPGLE TAVLNADDAL GQRLIRETTA EHILTYSAVG ASADLVAREV EAGSDGIRFT LEVAGEAWPV QAALFGLFQV GNLLATLAAL RALGHSWPAA VDAVSRLRGV PGRMERFELP SGALLVVDYA HTEQALAAAL DALRPHTAGR LIAVFGCGGD RDVTKRPAMG RAASARADQV IVTDDNPRSE DPAAIRAAVL AGCDRPEACR ELGDREAAVR AAVAEAGPGD VILLAGKGHE TTQQVGTQFY PFSDRELALA LAARTNAGDS GGGIQ
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