| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2184 |
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| Symbol | |
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| ID | 8807963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2297518 |
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| End bp | 2299236 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_003461410 |
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| Protein GI | 289209344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.48405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACA CGACAACGGC GCCCCGCCTG CCGGGTCTGG CCAAGCGTCT CGTGGACGCC
GGCCTGATTG CGGAAGATAT CGCTGCCCAG ATCGCCGAGG AATCGCGCGC TCAGCAGACC
CCTTTGATGC CCCTGCTCGC CAGCAAGGGG CAGGTCTCCG AGGCCCGCCT GGCCGAGGCC
GCGGCCGAGG AGTTCGGCCT CCCGGTACTG GATTTGTCGT GCTTTGAACC CGAGCTGCTG
CCCAAGGATC ACCTGAACGA GAAGCTGATC CAGAAACACC ACGCCCTGCC GATCATGCAG
CGCGGCAACC GCCTGTATAT CGCGGTATCC GACCCCACCA ACCTGGGGGC CACCGACGAG
TTCAAGTTCG CGACCGGGAT GCCGGTGGAG GCCGTACTGG TCGAGGGGCA CAAGCTCGAC
CGCCTGATCG AAAGCGCCCT GAGCGCTGCG TCGTCGCTGA TGGACGACCT GGGCGACGAC
GATCTCGAAA ACCTGGCCAT CGAATCGGGT GGCGGCGATG ACGGCGACAC TTCGGACGCC
GCCGACGCGG TGGACGACGC GCCCGTGGTG CGCTTCGTCA ACAAGGTGCT GATGGACGCG
ATCAACCGCA AGGCGTCGGA CATCCACCTC GAGCCGTTCG AGAAGGATTT CCGCGTGCGC
TTTCGCATCG ACGGCGTGCT GCACGAGATC GCCCACCCGC CGAACACCCT GGCGCCACGC
ATCACCGCGC GGGTCAAGGT CATGTCGCGC ATGGACATCG CCGAGCGGCG GGTCCCGCAG
GATGGGCGCA TCAAGCTGAA GCTCTCGCGC ACGCGAGCGA TCGATTTTCG TGTCAGCACA
CTGCCCACAC TGTACGGCGA AAAGATCGTA ATGCGTATCC TCGACCCGAG CAGCACCCAG
ATCGGGATCG ATCAGCTCGG CTACGAGGAG CACCAGAAGG AGGCCTACCT CCAGGCGCTC
AAGCGACCCT ACGGGATGAT CCTGGTCACC GGGCCGACCG GCTCGGGTAA AACGGTGTCG
CTGTACACCG GCCTTGGGAT CCTGAACACG GCCGACCGCA ACATCTCCAC CGCGGAAGAC
CCCTCGGAAA TCAACATGCC CGGGGTCAAC CAGGTCAACG TGAACCCGAA GGTCGGGCTG
ACCTTCGCCA GCGCGCTACG CGCCTTCCTG CGTCAGGATC CGGACGTGAT CATGGTGGGG
GAGATCCGCG ACCTCGAGAC CGCGGAGATC GCGATCAAGG CGGCGCAGAC AGGGCACCTG
GTGCTCTCCA CGCTGCATAC CAACGATGCC CCGCAGACCC TGACCCGACT GGCGAACATG
GGGGTACCCC CCTACAACAT CGCCTCCTCG ATCCTGCTGA TCATCGCTCA GCGCCTGGCG
CGCCGGCTGT GCCCGAACTG CAAGGAACCG GAGGATCTCC CGGAAGAGGT CCTGCGCAAG
GAGGGCTTCA CCGACGCCGA CATTCAGGCC GGCGTAACCG CGTATCGAGC AGTGGGCTGC
GATCAGTGCA CGAACGGCTA CAAGGGGCGG GTCGGCATCT ATCAGGTCAT GCCGATCAGC
GAAGAGATGC AGCGCGGGAT CCTGGAGGGC TACAACTCCA TGCAGCTGGC TCAACAGGCC
GCAAAGGAAG GGGTCGAGGA CCTGCGTCGC GCCGGCCTGG TAAAGGTTCT GGCAGGGATG
ACCAGCCTCG AGGAAGTTAA CCGCGTGACC AAGGACTAG
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| Protein sequence | MPNTTTAPRL PGLAKRLVDA GLIAEDIAAQ IAEESRAQQT PLMPLLASKG QVSEARLAEA
AAEEFGLPVL DLSCFEPELL PKDHLNEKLI QKHHALPIMQ RGNRLYIAVS DPTNLGATDE
FKFATGMPVE AVLVEGHKLD RLIESALSAA SSLMDDLGDD DLENLAIESG GGDDGDTSDA
ADAVDDAPVV RFVNKVLMDA INRKASDIHL EPFEKDFRVR FRIDGVLHEI AHPPNTLAPR
ITARVKVMSR MDIAERRVPQ DGRIKLKLSR TRAIDFRVST LPTLYGEKIV MRILDPSSTQ
IGIDQLGYEE HQKEAYLQAL KRPYGMILVT GPTGSGKTVS LYTGLGILNT ADRNISTAED
PSEINMPGVN QVNVNPKVGL TFASALRAFL RQDPDVIMVG EIRDLETAEI AIKAAQTGHL
VLSTLHTNDA PQTLTRLANM GVPPYNIASS ILLIIAQRLA RRLCPNCKEP EDLPEEVLRK
EGFTDADIQA GVTAYRAVGC DQCTNGYKGR VGIYQVMPIS EEMQRGILEG YNSMQLAQQA
AKEGVEDLRR AGLVKVLAGM TSLEEVNRVT KD
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