Gene TK90_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2183 
Symbol 
ID8807959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2295718 
End bp2296908 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranslation elongation factor Tu 
Protein accessionYP_003461409 
Protein GI289209343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.557033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGG AAAAGTTCGA GCGTAAGAAG CCGCATGTGA ATGTGGGGAC GATTGGTCAT 
GTGGACCATG GCAAGACCAC GCTGACGGCG GCGATGACGA CGGTGCTGGG CAAGAAGTAC
GGTAGCGAAG CCCGTGCGTT TGACCAGATC GACAATGCGC CGGAAGAGAA GGCGCGCGGG
ATTACGATTG CCACGGCGCA CGTGGAATAC GAATCCGACA TTCGTCACTA CGCGCATGTG
GATTGCCCTG GGCACGCGGA CTACGTGAAG AACATGATCA CGGGTGCGGC GCAGATGGAC
GGCGCGATTC TGGTGGTGTC CGCGGCCGAT GGTCCGATGC CGCAGACCCG CGAGCACATT
CTGCTGGCGC GTCAGGTGGG TGTGCCGTAC ATCGTGGTGT TCCTGAACAA GGCCGACATG
GTCGACGACC CCGAGCTGCT CGAGCTGGTC GAGATGGAAG TGCGCGATCT GCTGTCTTCC
TATGATTTCC CGGGCGACGA CACCCCGGTG ATCACCGGTT CCGCGCTGAA GGCGCTGGAA
GGTGACGAGA GCGAAGTGGG CGCGCAGGCG ATCTACAAGC TGGTCGAGGC GATGGACAGC
TGGATTCCGG AGCCGGAGCG CGCGGTGGAC GGCGACTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CCGGGCGCGG CACTGTGGTG ACGGGTCGTA TCGAGCGCGG TGTGGTCAAG
GTGGGCGAGG AGATCGAGAT TGTCGGTATC CGCGACACCC AGAAGACCAC CGTCACGGGT
GTCGAGATGT TCCGCAAGCT GCTGGACCAG GGCGAAGCGG GCGACAACGT GGGCATTCTG
CTGCGTGGTA CCAAGCGCGA CGAAGTGCAG CGTGGTCAGG TGCTGTGCAA GCCGGGTTCG
ATTACGCCGC ACACGCATTT CGAGGCTGAG GTGTACATTC TGGGCAAGGA CGAGGGTGGT
CGTCATACCC CGTTTTTCAA TGGTTATCGC CCGCAGTTCT ACTTCCGCAC GACCGATGTG
ACGGGTTCGG TGGAGCTGCC GGAAGGCACC GAGATGGTGA TGCCGGGTGA CAACGTGAAG
ATGACCGTGT CGCTGATCAG CCCGATCGCG ATGGAAGATG GTCTGCGCTT TGCGATTCGC
GAAGGCGGCC GTACCGTCGG CGCCGGCGTC GTATCCAAGA TCATCGAGTG A
 
Protein sequence
MSKEKFERKK PHVNVGTIGH VDHGKTTLTA AMTTVLGKKY GSEARAFDQI DNAPEEKARG 
ITIATAHVEY ESDIRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKADM VDDPELLELV EMEVRDLLSS YDFPGDDTPV ITGSALKALE
GDESEVGAQA IYKLVEAMDS WIPEPERAVD GDFLMPVEDV FSISGRGTVV TGRIERGVVK
VGEEIEIVGI RDTQKTTVTG VEMFRKLLDQ GEAGDNVGIL LRGTKRDEVQ RGQVLCKPGS
ITPHTHFEAE VYILGKDEGG RHTPFFNGYR PQFYFRTTDV TGSVELPEGT EMVMPGDNVK
MTVSLISPIA MEDGLRFAIR EGGRTVGAGV VSKIIE