Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2139 |
Symbol | |
ID | 8807914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2259153 |
End bp | 2260505 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003461365 |
Protein GI | 289209299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.110862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCA AGGTATACAT CCAGACACAC GGGTGTCAGA TGAACGAGTA CGACTCCGAC CGCATGCTCG ACGCCCTGCG CGAGCTGCAC GGGGCGGAGC GTACCGATGA CCCCGAGCAG GCCGATGTCT TGCTGATGAA TACCTGCTCC ATCCGCGAGA AGGCACAGGA GAAGGTGTTC TCGCTGCTGG GGCGCTGGCG GCAGATCAAG GAGCGCCGAC CCGAGGTGAT CATCGGGGTT GGCGGCTGTG TGGCCAGCCA GGAGGGCGAT GCCCTGCGCG AACGGGCCCC GTACGTGGAT CTGGTGTTCG GCCCGCAGAC GCTGCACCGC CTGCCGGCGA TGATCCAGTC GGTGCGCCGC GAGCGGGCGC CGGTGGTGGA TATCTCCTTC CCCGAGATCG AGAAGTTCGA CCGTCTGCCC GAGCCGAAGG CCGATGGCCC GACCGCGTTC GTCTCGGTGA TGGAGGGCTG TTCCAAGTAC TGCAGCTTCT GCGTGGTGCC CTATACCCGC GGCGACGAGA TCAGCCGGCC GTTCGACGAC GTGATCGCCG AGGTCGTGGC GCTGGCCGGG CAGGGGGTCA AGGAGATCAA CCTGCTGGGG CAGAATGTGA ATGCCTACCG CGGGCCGATG GAGGACGGTG ATACCGCCGA CCTCGCCCTG CTGATCCACT ATGTCGCCGC GGTGGACGGG ATCGAGCGCA TCCGCTTCAC CACCTCGCAC CCGGTGGAGT TCTCCGATTC GCTGATCCAG GCCTATGCCG ACGAGCCCAA GCTGGTCGGC CACCTGCACC TGCCGGTACA GAGCGGTTCC GACCGCATCC TGGCGCAGAT GAAGCGCGGC CACACGATCC TGGAATACAA GTCCAAGATC CGCCGCCTGC GCGAGGCGCG CCCGGATCTG GACCTGTCCT CCGACTTCAT CGTCGGCTTC CCCGGCGAGA CGGATGCCGA CCACGCGGCG ACCATGAAGC TGATCGAGGA GCTGCATTTC GACTTCTCCT TCAGCTTCAT CTACAGCGCC CGCCCGGGCA CGCCGGCGGC CTCGCTGCCG GACGACGTGC CGCTGGCCAC CAAGAAGGCC CGCCTGGCCG AGCTGCAGGC CCTGATCGAG CAGCACGGGC GCGAGCGCAA CCAGGCCATG GTCGGCAACA TCGAGCCCGT GCTGGTCGAG GGCCCGGCCA AACGCAATCC CGGCGAACTG GCCGCACGTA CGGCGAACAA CCGCATCGTG AACTTTGCGG GCGACCCCAG CCTGATCGGA CAGATGATCC CGGTCGAGAT CACCGAGGCC CTGGCGCATT CCCTGCGCGG CCGTGCGGTC GAGCGGGCGA TGCCCGCCGC CGTCGGCGCC TGA
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Protein sequence | MIRKVYIQTH GCQMNEYDSD RMLDALRELH GAERTDDPEQ ADVLLMNTCS IREKAQEKVF SLLGRWRQIK ERRPEVIIGV GGCVASQEGD ALRERAPYVD LVFGPQTLHR LPAMIQSVRR ERAPVVDISF PEIEKFDRLP EPKADGPTAF VSVMEGCSKY CSFCVVPYTR GDEISRPFDD VIAEVVALAG QGVKEINLLG QNVNAYRGPM EDGDTADLAL LIHYVAAVDG IERIRFTTSH PVEFSDSLIQ AYADEPKLVG HLHLPVQSGS DRILAQMKRG HTILEYKSKI RRLREARPDL DLSSDFIVGF PGETDADHAA TMKLIEELHF DFSFSFIYSA RPGTPAASLP DDVPLATKKA RLAELQALIE QHGRERNQAM VGNIEPVLVE GPAKRNPGEL AARTANNRIV NFAGDPSLIG QMIPVEITEA LAHSLRGRAV ERAMPAAVGA
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