Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2121 |
Symbol | |
ID | 8807896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2239279 |
End bp | 2242119 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Phosphoenolpyruvate carboxylase |
Protein accession | YP_003461347 |
Protein GI | 289209281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.180736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAA CCGACCTAGA CGACCGATTC CTGCCCAAGG ACAAGGAACT GCGCGCCCGC GTGCGCCTGT TCGGCGAACT GCTGGGTAAC GTCATTCGCA AGCTGGAAGG CCAGACCGTA TTCGACGCGG TGGAAAAGCT CCGCCGCGGT TTCGTGAGCC TGCGCAAGGA CGAAGATCCC CAGCTGCGCC AGCGTCTGAT GGCGGACATC ACCCATTTTG ACGCAGCCCT GACCGAACGC GTAATCCGCG CGTTCAGCAT CTACTTCAGC CTGGTCAACA TCGCCGAGGA AGACCTGTTC TACCGCTGGC GGCGCGCGCA GGTCTCCAGC GGAGAACCGC TGTGGACCGG TTCGTTCGAC CAGACGCTGC GCGAATTGCA CAACGAGGGC GTGACCGCCG CCGAACTGGA ACGCCTGCTC GCGGAACTGC ACTACCAGCC GGTGTTCACC GCGCACCCCA CCGAGGCCCG TCGCCGGACC ACGATGGAGA ACCAGCGCCG TGTGTTCGAG ACGGCCGACC GGCTCAACCA GCCCGAGCTG GGCGAGGAAG AGCGCCGCCT GATCATCGAG GAGCTGGAGA CCCAGATCCA GCTACTGTGG CGCACCAACG AGGTGCGGGT GAAAAAGCCG CAGGTCCAGG ACGAGATCAA GTACGGGCTG TTCTATTTCG AGGAGAGCCT GTTCGAGGCG ATACCGCAGT CCTACCGCTT CCTGGAGAAG GCCATCCGGC GCATCTACGG GGTACACCCC GACGGCAGCC TGCCCGTGCG CATCCCGGCC TTTCTGCACT TCGGCTCCTG GATCGGCGGG GACCGCGACG GCAACCCGAA CGTCACCCCG GAAGTCACCG AACTGGCCTG TCGCCTGGCG ATGGAACAGG TCCTGCGCGA ATACATCAAG CGGGTCAACC ACCTGCGCAA TGTCCTCACC CACTCGGCCT ACATGTGCCA ACCGTCGCAG GAATTCCTCG ACAGCCTGGA CGCCGACAGC AACATCGCCA ACGCCGTGTT CCACGGCGCC TCCGACCGTT TCGAGAGCGA GCCGTACCGG CGCAAGCTGT ACATCATGCG CTACCGCCTG CGCGAGACGC TGGAGACGGT CTGCCGGCGC ATCCAGGGCG AAGCGGCCGT GCTGCCGACC AACAGCGCCT ACGCCGACGC CGATGCCTTT CTGCAGGACC TGAACCTGAT CCGCGACTCG CTGATCAGCC ATGGCGACCG CAACATCGCC TCCGGCGCGC TGACCGACCT GATCCGCCTG GTCGAGACCT GCGGCTTCCA CCTGCATCAC CTGGATGTGC GCCAGGAGTC CACGGTCCAT GGCGAGGCCG TCGCCCAGCT GCTGCAGCAA CTGGCCCCGG AGGTCGACTA CAACACGCTG GACGAGTCCG ACCGTCAGAA GGTCCTGAGC GATCTGATCG CGGCACCGGC GCTGGCCGAT CTGAATCGCG AGGCCCTCGA CGAGGGCGCG CTGGAGACCC TGCGCGTATT CGAGGTCATC CAGGCGATGC GCCGCGAGAT CGGTCCGGAC GGCATCGGCA CCTATGTGAT CTCGATGACC CATGCCGCCT CGCATGTGCT GGAGGTCCTG CTGCTGGGCC GTCTGGCGGG GCTGGCCGGC GAAGACGAGA GCGGCGAGCC GTTCTGCCAC CTGCGCATCT CGCCACTGTT CGAGACCATC GAGGACCTGC TGCACGTCGA GGATGTGCTG GAGGGCCTGC TGTCCAACCC GGTCTATGCC CGCCTGCTGA CCGCCTCCGG CAACGTCCAG GACGTGATGC TTGGCTACTC CGACTCCTGC AAGGATGGCG GCATCCTCGC CTCCAGCTGG AACCTCTACG AGGCGCAGAA GAAGATCGTC GGGATCACCG ACCGCTTTGG CGTGCGCTGC CAGCTGTTCC ACGGGCGCGG CGGCACCGTG GGCCGCGGTG GCGGCCCGAC CCATGAGTCC ATCCTCGCCC AGCCCCCGGC CACCGTGCAG GGGCGGATCA AGTTCACCGA GCAGGGCGAG GTACTGTCGT ACAAGTACTC CAATGCAGAG ACCGCGGTCT ACGAACTGGG CATGGGGGCG ACCGGTCTGA TGCTCGCCTC GCGCAGCCTG ATCCGCCCGG CACGCCAGGA CCGTGACGAA TACCGCGCCA CGATGGACGA GCTGGCCCGT GCCGGCGAGG ATGCCTACCG CGACCTGATC GACCGCACAC CGGGGATTCT CGACTACTTC TACGAGATCA CCCCGGTGCA GGAGATCGGT TTCCTGAACA TCGGCTCGCG GCCCTCGCAC CGGCGCAAGA CGGACCGTTC CAAGAGCTCG ATACGGGCGA TCCCCTGGGT GTTCGGCTGG GCGCAGTCGC GCCATACCCT GCCCGCCTGG TACGGGATCG GATCGGCGCT GGAGCAGTGG CGGGGCGAGG ATCCGGCACG CCTGGAACAG CTGCAGCGGA TGTACCAGGA GTGGCCGTTC TTCCGGTCCC TGCTGTCAAA CTGCCAGATG GCGCTGACCA AGGCCGACAT GCGCACCGCG GCCGAGTACG CGCGCCTTTG CAGCGATCCG GCACTGGCCG AGCGCCTGTA CTCGCGCGTA CGCGAGGAAC ACACGCGCAC GGTCAACGAG GTCCTGCGCG TCGCCCGGCT GGACAACCTG ATGGACGAGA CGCCGCTGCT GGCGCGCTCG CTGCAACGGC GCAACCCGTA TCTGGACCCG CTCAACAGCA TCCAGATCCA CCTGCTGCGC GAGTCGCGTC AGTTCGATGC CCAGGCCGAC GATGACGCGG ACAACCCCTG GCTGTCGCCA CTGCTGCGCT CGATCAACGC GATCGCCGCC GGGATGCGCA ACACGGGCTG A
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Protein sequence | MTQTDLDDRF LPKDKELRAR VRLFGELLGN VIRKLEGQTV FDAVEKLRRG FVSLRKDEDP QLRQRLMADI THFDAALTER VIRAFSIYFS LVNIAEEDLF YRWRRAQVSS GEPLWTGSFD QTLRELHNEG VTAAELERLL AELHYQPVFT AHPTEARRRT TMENQRRVFE TADRLNQPEL GEEERRLIIE ELETQIQLLW RTNEVRVKKP QVQDEIKYGL FYFEESLFEA IPQSYRFLEK AIRRIYGVHP DGSLPVRIPA FLHFGSWIGG DRDGNPNVTP EVTELACRLA MEQVLREYIK RVNHLRNVLT HSAYMCQPSQ EFLDSLDADS NIANAVFHGA SDRFESEPYR RKLYIMRYRL RETLETVCRR IQGEAAVLPT NSAYADADAF LQDLNLIRDS LISHGDRNIA SGALTDLIRL VETCGFHLHH LDVRQESTVH GEAVAQLLQQ LAPEVDYNTL DESDRQKVLS DLIAAPALAD LNREALDEGA LETLRVFEVI QAMRREIGPD GIGTYVISMT HAASHVLEVL LLGRLAGLAG EDESGEPFCH LRISPLFETI EDLLHVEDVL EGLLSNPVYA RLLTASGNVQ DVMLGYSDSC KDGGILASSW NLYEAQKKIV GITDRFGVRC QLFHGRGGTV GRGGGPTHES ILAQPPATVQ GRIKFTEQGE VLSYKYSNAE TAVYELGMGA TGLMLASRSL IRPARQDRDE YRATMDELAR AGEDAYRDLI DRTPGILDYF YEITPVQEIG FLNIGSRPSH RRKTDRSKSS IRAIPWVFGW AQSRHTLPAW YGIGSALEQW RGEDPARLEQ LQRMYQEWPF FRSLLSNCQM ALTKADMRTA AEYARLCSDP ALAERLYSRV REEHTRTVNE VLRVARLDNL MDETPLLARS LQRRNPYLDP LNSIQIHLLR ESRQFDAQAD DDADNPWLSP LLRSINAIAA GMRNTG
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