Gene TK90_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2112 
Symbol 
ID8807887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2229454 
End bp2230110 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003461338 
Protein GI289209272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.835545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTT CTTCGCGGCG GATATTTCTC GCGGGCGGTC TGGCGGGGCT GCTGGCCCTG 
CTCGCCGGTT GTGGCGGCAG CGGCCCCGGT GACCTGGAGC CGCTGCCTCG CTCGGCGACC
GTGCTGGCGT TCGGGGACAG CGTGACCCAC GGCACCGGCG CCTCGCGCGG GGAGGATTTT
CCGGCGCGGC TGTCCGAGAT CACGGGCTGG CAGGTGGTGA ACGAGGGCGT GCCGGGCGAT
CGCGCCGATA CGGCGCGTAC TCGGCTGGGT CGCAGCCTGC GCGAGCATGA TCCGGATCTC
GTGATCATCG GTCTGGGCGG TAATGACTTT CTGCGTCAGC GCGCCGCCTC GGCGGTCAAG
GAAGACCTGC GGGCCCTGAT CCACGAGGTG CGCGAGCATG GCGCCCAGCC CCTGTTGCTT
GGCGTGCCGT CGGCCTCGGC CTTTGCGGCC GCGACGGGGC GCCTGCGCGA CGACGGCCTC
TATGGCGAGC TGGCGCGCGA AGAGGGTGTC CCGCTGATCG GCGCAGTGCT CTCGGATGTC
CTGTCGAGCC GCGATCTGCG CGCCGACCGC ATCCATCCGA ATGCGGCCGG CTATCAGCAA
ATGGCGGAAC AAATCGCCGA CGGGCTGGAG GAGCTCGGCC TGTGGCTTGC CCCCTGA
 
Protein sequence
MIVSSRRIFL AGGLAGLLAL LAGCGGSGPG DLEPLPRSAT VLAFGDSVTH GTGASRGEDF 
PARLSEITGW QVVNEGVPGD RADTARTRLG RSLREHDPDL VIIGLGGNDF LRQRAASAVK
EDLRALIHEV REHGAQPLLL GVPSASAFAA ATGRLRDDGL YGELAREEGV PLIGAVLSDV
LSSRDLRADR IHPNAAGYQQ MAEQIADGLE ELGLWLAP