| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2104 |
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| Symbol | |
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| ID | 8807879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2222522 |
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| End bp | 2223427 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003461330 |
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| Protein GI | 289209264 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.443082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCACCG CCGCGACGAC CTCACCGGTC CTCGACCGCT TCCTGGACGA GCTCTGGGCG
GTCGAGGGCC TCTCGGACCA TACCCTGGCG GCCTACCGGC GCGACCTCGA GGCCCTGGCG
CGCTGGCTGC ATGGGCGCGG GGTTGCGCTC GAGGCAGCCA GTAGCGCCGA TCTTCTGGCG
TTCGTCAGTG CCCGCATGCA GGCGGGGGCA CGGCCGAAAT CCATTACCCG CGCGCTGTCC
AGTATTCGTC GCTTCTATCG CTATCTGGTG CATCAGGGCG AACGCGAGGA CGATCCCAGC
GCCGGAATCG AATCCCCGCG TGCCGGCCGC CCGTTGCCGG ACAGCCTGTC CGAGACTCAA
GTCAATGCGC TGCTGGCGGC CCCCGAGCTG CACACTGAAG TGGGTCTGCG TGACCGCGCG
ATGCTCGAAC TGATGTACGC CACCGGCCTG CGCGTATCCG AGCTGGTTGG GCTGGAGCAG
TCCGAGGTGA ACAGCCGTCA GGGGGTGGTG CGCATCACTG GCAAGGGCGA CAAGGAACGC
CTGGTACCGC TGGGTGAGGA GGCTGCCCAC TGGCTGGCGC GTTATCTGCG AGAGGCACGC
GGTGCACTGA TGTCCGGCCA TCCGCCAGTG GATACCGTGT TCGTGACCCG GCGAGGCAGG
GGGCTCACCC GTCAGGCCTT TTGGTATCGC ATCAAGCACT ACGCCCAAGT GGCCGGAATC
GAAGTGCCGC TGTCGCCCCA TACCCTGCGC CACGCGTTCG CGACCCATCT GCTCGACCAC
GGCGCGGATC TGCGTGTGGT GCAGATGCTG CTGGGCCACA GCAGCCTGTC GACCACGCAA
ATCTATACCC ACGTCGCACG CGCCCGCCTG CAGAGCCTGC ATGCGGAACA TCATCCCCGC
GGCTGA
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| Protein sequence | MTTAATTSPV LDRFLDELWA VEGLSDHTLA AYRRDLEALA RWLHGRGVAL EAASSADLLA
FVSARMQAGA RPKSITRALS SIRRFYRYLV HQGEREDDPS AGIESPRAGR PLPDSLSETQ
VNALLAAPEL HTEVGLRDRA MLELMYATGL RVSELVGLEQ SEVNSRQGVV RITGKGDKER
LVPLGEEAAH WLARYLREAR GALMSGHPPV DTVFVTRRGR GLTRQAFWYR IKHYAQVAGI
EVPLSPHTLR HAFATHLLDH GADLRVVQML LGHSSLSTTQ IYTHVARARL QSLHAEHHPR
G
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