Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2097 |
Symbol | |
ID | 8807872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2213333 |
End bp | 2214994 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003461323 |
Protein GI | 289209257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACC GAATCGCCCA CCGCATCGCC CACCGCGTCG CCCATCGGAT CACGCGCATC ATCACCCTGC TGGCCCTCGC CCTCGCGACG GCCCTCGCTA CCGGTCCCGC CCTGGCCGAC GACCTCGAGA TCACGCACTG GGGCGCCGAG CTGGAATGGT TCCTGGAGGC CGGCGCCCCG GCGCCGGGGG CAACGGAGAC CTTCGTGGTC CATGCCACCT GGCTGGACGA CTTCCGGCCG GTCACCACGG GGGAGGTAAC CCTGCAGATG CATAACCGCT ACGGGGAGAT ATTCAGCGAG GCCACGGCCG GCCTCGACCG GGAAGGCATC TTCGCGGTCC CCCTGACCCT GCCCGCGCCG GGACGCTATT ACCTGACGGC CGTCCACGAA GACGCCGACG GCATGCGCGA GAGCACGCTC GGTCAGGTAC ACGTCCCCGG GGATCACGAC CAAGGGGACG AAGATCACGG TCACGACCAT GACCATGACC ATGCGGGCGA CGACCGCAGG CATGCCCATG GCGAGGACGA CCACGGAGAC GATCACGGCC ACGATGACCA TGGACACGAT CACGGCCATG GCGACGAAGG GCACGCGCAC GACGCGGACG ACACGATCAC CTTTCTCAAG GAGACCCAGT GGCGCATGCG CTTCGCCACC GCCCCGGCCC GTTATGAGCC GTTCGCCGAA CGCATCGAAG TCCCGGGGAC CATCCGCGAG GTACCCGGCA AGCGCACGCG GCTGATCGCG CCCGCCGATG GCGTCATCAC GGCCGACGGG GAATGGCCGG CACCCGGGCG CGAGGTCAAC GCCGGGGACA GTCTGATGCG TCTGGCGGTC TTGCCGGACA GCGGCACCTC CAGCGGCCTG GCCCTGGATC TCGCCCGCGC ACAGGAACGT CTGACCGCGG CCGAGGCGGA TCTGGAGCGT CTGACGGCGC TCGCCGAGGA GGGCGTGATC GCCGACAGTC GGGTGGTGGA GGCCCGCCGC GAACGCAACA CCGCGCGGGC CGAACTGGAC GACGCCCGCG ACCGCCAGGA ACGGCTCGAC GGTAGCGCCG TCTCCGGCAC CCTGGCCCTG CGCGCCCCGG CGGGTGGCCG GGTGGAGTCC CTGGATGTCA GCCCCGGAGA GGTCGTCCAG GCCGGCCAGC AACTGGCCCG CGTGCTCGAT GGCGAGACGC TGTGGCTGGT GGCGCACCTC TACCCGGCGG ACCTGGAGCG GGTCACCTCC CTGGCCGATC CGGCCATGCG CCACCCGGGC AGTCGCGAGT GGCATGCCAT CGGCGGCGAA CCGGTCTGGG AAGGCGGTGC ATTCGACGGG CCCGGGCAGA CGCTGCCGGT CGCCTTTGCG CTGGAGGACA CGGACACCCG GTACCGGCCC GGCATGCCGC TGACCGTCTC GCTGGCGGCA GGGCCATCGC GGCACCGCGT CACGCTCCCG GCCGCGGCAC TGATCGACGA CGACGGCGTG CAGGTGGTGA TGGTCCAGAC CGGGGGCGAG ACGTTCGAGC GGCGACCGGT GCGTACCGGG ATTCGTTCCG CCGGCCGGGT GGAGATCCTC GCCGGGGTCG AGGCGGACGA ACGGGTGGTG GTCCAGGGCG CCTATGCAGT CCTGCTCGCG GGCCGCGATA CCGATGACAT CGGCCACGGC CACAGCCACT AG
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Protein sequence | MTHRIAHRIA HRVAHRITRI ITLLALALAT ALATGPALAD DLEITHWGAE LEWFLEAGAP APGATETFVV HATWLDDFRP VTTGEVTLQM HNRYGEIFSE ATAGLDREGI FAVPLTLPAP GRYYLTAVHE DADGMRESTL GQVHVPGDHD QGDEDHGHDH DHDHAGDDRR HAHGEDDHGD DHGHDDHGHD HGHGDEGHAH DADDTITFLK ETQWRMRFAT APARYEPFAE RIEVPGTIRE VPGKRTRLIA PADGVITADG EWPAPGREVN AGDSLMRLAV LPDSGTSSGL ALDLARAQER LTAAEADLER LTALAEEGVI ADSRVVEARR ERNTARAELD DARDRQERLD GSAVSGTLAL RAPAGGRVES LDVSPGEVVQ AGQQLARVLD GETLWLVAHL YPADLERVTS LADPAMRHPG SREWHAIGGE PVWEGGAFDG PGQTLPVAFA LEDTDTRYRP GMPLTVSLAA GPSRHRVTLP AAALIDDDGV QVVMVQTGGE TFERRPVRTG IRSAGRVEIL AGVEADERVV VQGAYAVLLA GRDTDDIGHG HSH
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