Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2000 |
Symbol | |
ID | 8807774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2124795 |
End bp | 2125610 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_003461227 |
Protein GI | 289209161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC TCCCCGAGGT CGAGACCACC CGGCGCGGGC TGTCGCCTCT TCTTGAAGGC CAGACTATCG AATGGCTCGA GGTACGCAAT GGGCGCCTGC GCTGGCCCGT ACCGGAGGAA TTGCCCGGGC GTCTGGCCGG GGCCCGCATC ACGACACTGG CGCGACGCGC CAAATACCTG CTGCTGAACA CCGATCGTGG CGGGGCACTA TTGCATCTTG GCATGTCCGG CTCGCTGCGC CACTGCATGC CGGGCGTCCC GCTGCGCACG CACGATCACC TGATCCTGCA TCTGACGAAC GGCGCGCAGG TGCGCTTTCA TGATCCGCGC CGCTTTGGAT GTTGCCTGCC GCTGCCGGAG ACCGGCGAGC CACATCCCCT GCTGGCCGCA CTGGGGCCGG AGCCCCTGGA CGCCACATTC AACGGCGACC ACCTGTTCCG CCGCAGCCGC GGGCGCCGGG GTCCGATCAA GGCCTTCATC ATGGATCAGG ATGTCGTGGT CGGCGTGGGC AACATCTATG CGACCGAGGC GCTGTTCCTG GCCGGAATCC GTCCGGGGCG GGCCGCCGGG CGCGTGACCC GGGCGGAATA CGAACGACTG GCCGGATTCA TCCGCACCGT GCTGGGCGCG GCGATCGAAC AAGGCGGCAC GACCCTGCGC GACTTCCTGC GCGAGGACGG GACCCACGGG TACTTTCGCC AGTCACTGCG GGTCTACGGA CGCGCCGGAG AGCCGTGCCT GGAGTGTGCG ACACCGCTGC GCAACCGACG CATCGGGCAG CGCGCCTCGG CGTACTGCCC GACCTGCCAA CGGTAG
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Protein sequence | MPELPEVETT RRGLSPLLEG QTIEWLEVRN GRLRWPVPEE LPGRLAGARI TTLARRAKYL LLNTDRGGAL LHLGMSGSLR HCMPGVPLRT HDHLILHLTN GAQVRFHDPR RFGCCLPLPE TGEPHPLLAA LGPEPLDATF NGDHLFRRSR GRRGPIKAFI MDQDVVVGVG NIYATEALFL AGIRPGRAAG RVTRAEYERL AGFIRTVLGA AIEQGGTTLR DFLREDGTHG YFRQSLRVYG RAGEPCLECA TPLRNRRIGQ RASAYCPTCQ R
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