Gene TK90_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1952 
Symbol 
ID8807726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2074670 
End bp2076091 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotease Do 
Protein accessionYP_003461179 
Protein GI289209113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.151255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC CGATGCAATG GGCCCTGCTG GGGCTGATCC TGTTTGCCTT CTCCCTGCCG 
GCCTCGGCGT GCATGCTGCC GGACTTTGTC CCGCTGGCGG AGGAGCACAG CCCCGCGGTG
GTCAATATCT CCACCACGCG TGAGCGCGAG GGTGGTCAGA CGGGCGGACA CCCCGATTTC
GAGGGTTCTC CGTTCGAGGA CCTGTTCGAA CGCTTCTTCG GTTCGCCCCC GGGCGGTGAG
GGGGGGCAGG GACGGATGCC CGAGCGCAGC TCGCTGGGGT CCGGCTTTAT CTACACCGAG
GACGGTTACA TCATCACGGC GAACCACGTC GTGGAGGGGG CTTCCGAGGT CGTCGTGCAT
CTCTCCGACC GGCGTGTGTT CGATGCCGAA GTGGTCGGCA AGGACCCGCA AAGCGACGTG
GCTTTGCTGA AGATCGATGC CGATGATCTG CCGACGCTGG AGCTGGGCTC CTCGGACGAC
CTCAAGGTCG GCGAGTGGGT GCTCGCGATC GGCTCGCCGT TTGGCTTTGA CCACTCCGTG
ACGGCCGGGA TCGTCAGCGC CAAGGGGCGC AATCTCCCGA CCGAGAACTA CGTCCCGTTC
ATCCAGACCG ATGTCGCGAT CAACCCCGGG AATTCGGGTG GCCCGCTGCT GAATCTGGAC
GGCAAGGTCG TGGGGATTAA TGCCCAGATC TACAGCCGCA CCGGTGGCTT CATGGGGCTG
TCGTTCGCCG TCCCGATCGA GATGGTCGAG GATGTCGTCA AGCAGCTGCG CGAGCACGGC
GAGGTCACGC GAGGCTGGCT GGGCGTGCTG ATCCAGGAGG TGACGCGTGA TCTGGCTGAG
TCGTTTGGTA TGGACAAGCC CAGCGGCGCC CTGGTCGCCC GCGTGCAGTC GGACAGCCCG
GCCGAGAAGG CCGGCTTCGA GACGGGGGAT GTGATCCTCA AGTTCAATGG GATCGAGGTC
CCGAACTCCT CCGCCCTGCC GCCGATCGTG GGACGCACAC CGGTCGGCAC CGAGGCCGAG
GTGGAGATCC GTCGCGGCGA GGAGACCAGG ACCCTGATGG TCGAGATCGA ACGCCTGCCG
GACGATATCG CGGCGGAGCG CGGTGGTCCC CAGCCGGAGC AGGGAGAGCG TGCCGAGCCG
CAAAGCCTGC TCGGGATGCA TCTGGAGCCG CTGGACGCGG CCCAGGCCGA GGAGCTGGGT
CTCGACGGCG GGCTCGTGGT TACGGAGGTG ACCGGCAACC CGGCGCGTTC CTCCGGCATT
CGTCCGGGCG ACGTGATCGT GCAGTTCGGT CGCCACTCGG TGGATTCGCT GGACGCGCTG
GAAGAGCAGA TCGAGGCCGC CGGTAGTGGG CGCACGGTGC CGGTCCTGAT TCACCGCGAC
GGCAACCCGA CGTTTATCGC CTTGCGTATC CCGTCCGAAT GA
 
Protein sequence
MTRPMQWALL GLILFAFSLP ASACMLPDFV PLAEEHSPAV VNISTTRERE GGQTGGHPDF 
EGSPFEDLFE RFFGSPPGGE GGQGRMPERS SLGSGFIYTE DGYIITANHV VEGASEVVVH
LSDRRVFDAE VVGKDPQSDV ALLKIDADDL PTLELGSSDD LKVGEWVLAI GSPFGFDHSV
TAGIVSAKGR NLPTENYVPF IQTDVAINPG NSGGPLLNLD GKVVGINAQI YSRTGGFMGL
SFAVPIEMVE DVVKQLREHG EVTRGWLGVL IQEVTRDLAE SFGMDKPSGA LVARVQSDSP
AEKAGFETGD VILKFNGIEV PNSSALPPIV GRTPVGTEAE VEIRRGEETR TLMVEIERLP
DDIAAERGGP QPEQGERAEP QSLLGMHLEP LDAAQAEELG LDGGLVVTEV TGNPARSSGI
RPGDVIVQFG RHSVDSLDAL EEQIEAAGSG RTVPVLIHRD GNPTFIALRI PSE