Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1906 |
Symbol | |
ID | 8807679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2021689 |
End bp | 2023089 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | RNA-metabolising metallo-beta-lactamase |
Protein accession | YP_003461133 |
Protein GI | 289209067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC TGACCTTTCA GGGGGCGACC GGCGAAGTCA CCGGGTCGCG TTATCTCCTC GAGACCGACG ACGCCCGCAT CCTTCTGGAA TGCGGCCTGC ATCAGGGCAA CAGCGAGGCG GACGAGGCGA ATCGCGCCTC GCTGACCGAG CTGGCGGAAA CGATCAATGC GGTGATCCTG TCGCACGGGC ATCTGGATCA CTCGGGGCTA TTGCCCAAGC TCGTGCGCGA CGGCTACCGC GGGCCGATCT ACTGCACACC GGGCACGGAG GAGCTGCTCG AGATCATGCT CGAGGACGCC GCGTTCGTGA TGAGCAAGGA CATCGAGTGG GAGAACAAGT GGCGCCGCCG CGCGGACAAG CCCCTGCTGG AGCCAATCTA CGACATCGAT GATGTCGCAA CCACGCTGGG ACTTTGCCGG GCCATCCCCT ACGGCGACAC CCACACCATC GCGGGCGATG TCCGACTGAC CTTTCGCGAT GCCGGGCATA TCCTCGGTTC AGCCATCGTG GACCTGATCG TGCCATCCGG CGGGCGCGAC CGGCACCTGG TCTTCTCCGG AGACCTCGGC AATGCCGACG CGGTCCTGAT GCACGCTCCG ACCCGCCCGG AACACGCGGA CCACGTGCTG CTGGAGAGCA CCTATGGCAA CCGCGACCAC CGCCCGATGG ACGAGACGGT CGAGGAATTT GCTCAAGTGC TGGCCGAGGC CGACAAGAGC GGCGGCAACG TGCTGATCCC GGCCTTCGCC GTGGGGCGCA CGCAGGAGAT CCTCTACCAC CTGAGCATGC TGCATCACGC CGGCCGCCTG CCGCAGCAGA AGGTCTTCCT CGACAGCCCG ATGGCCATCA AGGTCACCGA GCTCTACGCC CGCCTGCGCC GGACGCTGGA CCCGGAGGAC ATGGACCGGC TGCACCAGGC CGCGAACGGC GACCCGAACG GCTATCTGCC CGGGCTTCAG GTCTGCCGCA CGGTGGAGGA ATCCATGGCG ATCAACCGCA TCACCGGTGG CGCGATCATC ATCGCCGGCT CCGGCATGTG CAACGGCGGA CGCATCCGTC ACCACATGAA ATACAACCTG TGGCGACGCG AGGCGCACCT GGTGATCGTC GGCTTCCAGG CGGCGGGTAC GTTGGGACGG CGGCTGGTGG ACGGCGCCGA GAAGGTCAAG CTGCTGGGCG AAGACGTTGC AGTGAACGCG AAGGTCCACA CCCTGGGCGG CTTTTCCGCC CACGCCGGGC GCAGCCAGCT GCTCGACTGG GCACGCGGTT TTCAGCACCA GCCGGTGTTC CATCTGGTCC ACGGCGAGCC AGAAGCGCGC GAGGCCCTGG CCGCCGGCCT GCGCGACGAG CTAGGGGCCG AGGCGCATGT ACCCGCCTTC GGCGAGACCA TCACCCTGTA G
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Protein sequence | MAQLTFQGAT GEVTGSRYLL ETDDARILLE CGLHQGNSEA DEANRASLTE LAETINAVIL SHGHLDHSGL LPKLVRDGYR GPIYCTPGTE ELLEIMLEDA AFVMSKDIEW ENKWRRRADK PLLEPIYDID DVATTLGLCR AIPYGDTHTI AGDVRLTFRD AGHILGSAIV DLIVPSGGRD RHLVFSGDLG NADAVLMHAP TRPEHADHVL LESTYGNRDH RPMDETVEEF AQVLAEADKS GGNVLIPAFA VGRTQEILYH LSMLHHAGRL PQQKVFLDSP MAIKVTELYA RLRRTLDPED MDRLHQAANG DPNGYLPGLQ VCRTVEESMA INRITGGAII IAGSGMCNGG RIRHHMKYNL WRREAHLVIV GFQAAGTLGR RLVDGAEKVK LLGEDVAVNA KVHTLGGFSA HAGRSQLLDW ARGFQHQPVF HLVHGEPEAR EALAAGLRDE LGAEAHVPAF GETITL
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