| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1897 |
|---|
| Symbol | |
|---|
| ID | 8807670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2013325 |
|---|
| End bp | 2013855 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | phosphoesterase PA-phosphatase related protein |
|---|
| Protein accession | YP_003461124 |
|---|
| Protein GI | 289209058 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGC CTCGGCGCAT GGATGAGGCG GAGCTGGCGA TCTGCCAGCT GTGCAATCAG
GTCAATCGTC AGTGGGCGGT CAGCCGCTTC TTCGGACTGA TCAGCCGGCT GGGAGACGGG
GTCGTCTGGT ACGGGCTGAT GCTCCTGCTA CCGCTGCTCC ACGGTCCCGA GGCCGCCTGG
GTCAGCCTGC AGATGGCCGT GGTGGGGCTG GCGTCATTAC CGCTGTACAA GTGGCTGAAG
CGCCGTACGA GCCGACCGCG ACCGTGCAAC CGCGGCCGTC CGTTCACCCG CACGGTGGAT
CCACTGGACG AGTTCAGCTT CCCCTCCGGC CACACCATGC ATGCGGTGGG ATTCACGGTC
GTGCTGGTAG CATGGTTCCC CGTCTGGGCC TGGCTGGTGG TGCCGTTCGC CGCCCTGGTT
GCCGCCTCGC GCCTGGTGCT GGCGCTGCAC TATCCCAGCG ATGTCGCAAT GGGGGCGCTA
ATCGGGGCCA GCATGGCCGG AGCGGTGCTG GCACTGGCCG GTCTGGTTTG A
|
|---|
| Protein sequence | MRMPRRMDEA ELAICQLCNQ VNRQWAVSRF FGLISRLGDG VVWYGLMLLL PLLHGPEAAW
VSLQMAVVGL ASLPLYKWLK RRTSRPRPCN RGRPFTRTVD PLDEFSFPSG HTMHAVGFTV
VLVAWFPVWA WLVVPFAALV AASRLVLALH YPSDVAMGAL IGASMAGAVL ALAGLV
|
|---|
| |