Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1866 |
Symbol | |
ID | 8807639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1981285 |
End bp | 1983132 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003461093 |
Protein GI | 289209027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.450839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.446941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTG AACTGGAAGA GATTCGCGAG TTCCTGGAAC GCTGCCCGGA ACTCGCGCGC CTGCCCGCCG AGACGCGCAC GGGTCTTGTT CGCCGTCTGA CCCTGCGCTA CCTGCGCGAG GACAGCCCGT TCCCGCCCGC CGATGCGCCC CCCGGCGAGC TGTGGATCGT GCGCACCGGG GCCGCCGAAC TGTACGACGC CCGGGACCAG CTCCAGGACC GTCTGGGCGA AGGCGACCTG CTCAACACCA CTCACGCCAG CAACCTGCAC GGCCGTATCA CCGAGGATGC CCTGATCTAC CAGCTGGAGG CCGACCGTGC CCGCGACCTC GCCGGCCGGG ACGAGGCCTT CCGCGAATTT GTCGATCTCG ACACCGACCG CTTGCGGGCA CCAGCGGCGA CCTCGCCCGC GGGCGAGCGC AGCCTGCTGA CTACCCCCGT GCGCGCCCTG ATGACACCGC GCCCGATCAT GTCGCCGACC AGCCTCACCC TGCGCGAGGC GGCCCAGCGC ATGACCGAAG CGGACATCTC CGCCCTGCTG CTGCACGCGC CCGGCCAGGG AGACATCCCG GTGGGCATCC TGACCGACAC CGACCTGCGC CATGCCCTGG CTGCAGGCAC CGACCCCGGA TGCAGCGTGG CCGAATGCAT GGCGCAGCCG GTCGCCGCGG TCAGCCGCGA CACTCCAGCC TTCGATGCCC TGCTGCGCAT GGCGCGGCGG GACATCCATC ATCTGCCGGT CACCAATGGC GAGAACGGCC CGCTGGTCGG CATTCTCTCC AGCACCGACC TGATCCGCCA TCAGGGCACC AGCGCGGTGT ACCTGGTACG CGACCTGCGC CGCGCCGACG GCCTCGACGC CCTGCGTGAC GTGATGCGTG CCCTGCCCAG CCTGCAGGTG CAGCTGGTCG AGGCCGGGGC CGATGCGACC CAGATCGGCC AGACCATCAC CACGGTGATC GACACCCTCA CGCAGTGCCT GATCGAACAG GCAGAAGCGA AGCTCGGTCC CGCGCCGGCC GCCTACGCCT GGCTGGCCAG CGGCAGTCAG GGGCGGCACG AACAGATGGT GCATACCGAT CAGGACACGG CACTGGTCTA CGACGATGCG GCACCCCCCG ATGCCGACGC CTGGTTCCAG CGCCTGGCCG AGGAGGTCGG CGAAGGCCTG GCGGCCTGCG GCATCCGCCG CTGCCCGGGC GATGTCGACC CGAGCCAGCC CCACTGGCGG CGCTCGACCC GCGACTGGGA GCACGAGATT CGGCGGGTGT TGAGCCATCC CTCACCGCGC GATGCGATGC TCGCCACCCA TTACCTCGAT CTGCGCGTGA TCCACGGCCC GACCCGCCTG TTCGAACCCG TACGCCACAC AGCCCTGGAA CAGGGCTATC GCAGCGAGGC GGTATTGCGC ATGCTCGCCG ACCAGGCACG GGAAGTGCGC CCGCCGCTGG GATTCTTTCG CCAGTTCGTA CTCGAACGCG GGGGCGAACA CGCCGACACC CTGGACCTGA AGATGCGCGG CCTGATGCCG ATCGTCGCGC TAGCCCGGGT GTTTGCCCTG CGCGCCGGGT CGGACGCCCG CAGCACGCTC GAGCGGCTGC GGGCCGCCCG CCACGCGGGT GTTCTGTCGG AGGGCACAGG CGCCGACCTG ATCGACGCCT GGCAGTTCAT CGCCACGCTG CGCACACGCC TGCAGGCCGA GCAGATCCGG CGCGGGTCCG CCCCCGACAA CGCCCTGTCC CCGAACGAGC TGTCCGGGCT GGAGCGCAGC CACCTGAAGA ACGCATTTCG CCTGGTGGCC CATGCGCAGA AGGCCGCCCT GGCCCAGGCC GAGCAGGTAC ACGGGTGA
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Protein sequence | MNGELEEIRE FLERCPELAR LPAETRTGLV RRLTLRYLRE DSPFPPADAP PGELWIVRTG AAELYDARDQ LQDRLGEGDL LNTTHASNLH GRITEDALIY QLEADRARDL AGRDEAFREF VDLDTDRLRA PAATSPAGER SLLTTPVRAL MTPRPIMSPT SLTLREAAQR MTEADISALL LHAPGQGDIP VGILTDTDLR HALAAGTDPG CSVAECMAQP VAAVSRDTPA FDALLRMARR DIHHLPVTNG ENGPLVGILS STDLIRHQGT SAVYLVRDLR RADGLDALRD VMRALPSLQV QLVEAGADAT QIGQTITTVI DTLTQCLIEQ AEAKLGPAPA AYAWLASGSQ GRHEQMVHTD QDTALVYDDA APPDADAWFQ RLAEEVGEGL AACGIRRCPG DVDPSQPHWR RSTRDWEHEI RRVLSHPSPR DAMLATHYLD LRVIHGPTRL FEPVRHTALE QGYRSEAVLR MLADQAREVR PPLGFFRQFV LERGGEHADT LDLKMRGLMP IVALARVFAL RAGSDARSTL ERLRAARHAG VLSEGTGADL IDAWQFIATL RTRLQAEQIR RGSAPDNALS PNELSGLERS HLKNAFRLVA HAQKAALAQA EQVHG
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