Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1831 |
Symbol | |
ID | 8807603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1945247 |
End bp | 1947043 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003461058 |
Protein GI | 289208992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000205605 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTGGA TTTTTCCGCT GATCTTCATC GGTGCGGGGC TCATTGTGGT CTCGGTGTTG ACGTCGGTGC TGTCGTTCCG GCTGGGTGCG CCGCTGCTGC TGGTGTTCCT GGGGATTGGC CTGCTCGCCG GCGAGGACGG ACTCGGGCTC GAGTTCGATG ATCCCAATAC GGCCTTCCTG ATCGGTAGCC TCGCGCTCGC CGTGATCCTG TTCGACTCGG GCTTTGGCAC CCGGCTGCGC ACCCTGCGCC GGGCGGCCGG CCCGGCCATC GTGCTGGCGA CGGTCGGGGT CGCGCTGACC ACGTTGCTGC TGGGGGTGGC CGCGCACTAC CTGCTGGATC TGCCCTGGGC CTATGCCCTG CTGCTGGGTG CGCTGATCAG CTCCACGGAT GCCGCGGCGG TGTTCTTTCT GCTGCGTGTG GGCGGGGTGA AGATTAACCG CCGTGTGCGT TCCATCCTCG AGGTGGAGTC GGGGTCCAAC GACCCGATGG CGATCTTCCT CACCGTGGTC TTTATCGAGT GGATCCTGTC CGGCACCACC GTGGGTGGTC TGGCCACGCT GTTTGCCACG GAGTTCCTGT GGCAGATGGG GCTGGGCCTG CTGTTGGGCG TGGTGGGCGG CTATCTGCTG GTGGAACTGG TCAACCGCCT GCCGCTGGAA GAGGGGCTTT ATCCCATCGC GGTGATGGCC GGGGCCGTCA CCCTGTTCGC GCTGGCCGGC TGGCTGGGCG GGAGCGGGTT CCTGGCGGCC TATGTGGCCG GCATCGTGGC CGGTAACCGC AAGCTGCGTG GGGCGGCGAA GCTGCACCGC CAGCAGCAGG GGCTGACGTG GCTGGCGCAG ATCAGCATGT TCCTGATCCT CGGCCTGCTG GCGACTCCCT CGGAGTTTCC GTCGCTGGCG TTGCCGGCGC TGGCGCTGGG GCTGGTGCTG ATTCTGGTCG CGCGCCCGCT GGCGGTCTGG CTGTGTCTGC TGCCGTTTCG CCAGGACTGG CGCAGCACGG CGTTTGTCTC CTGGGTCGGG CTGCGCGGGG CGGTGTCGAT CCTGCTGGCG ATCCTGCCGA TGGTGGCCGG GATCGAGGGC GGCGAGCTCT TCTTCAACAT CGTGTTCATG ATGGTGCTGG TCTCGCTGCT GGTGCAGGGC TGGACCATTC GTCCGGTGGC CGAGCGGCTC GGGCTGGTCG TGCCCCCGGA AATCGGCCCG GTGGAACGGG TGCAGCTGGA GCTGCCGGGC AGTCCCCGGC ACGAGCTGGC CGTCTACCGT GTGATCGAGG ACAGCCCGGT GCTGCGCGGG GCACGCCTGC CACGCTGGGC GCGCCCGTCA CTGGTGGTGC GCGAGGGGCG CTCGGTGCGC TACCAGCAGG CCGGGCATCT GACGCCGGGG GACTATGTCT ACATTTTTGT GGTACCGGAG CACGTACCGC TGCTGGACCG GTTGTTTGCG AGCCCCCGCA TACCGGGCCA CGAGGATCCG GAATTCTTTG GCGAGCTGCC GCTGCACCCG GAGAAGCGGC TGGCCGAACT GTGCGAGATA TACGGCGTGT CCTGTGACGC GGTGGATCAG CAGTTGACCA TCGGTGCATA CCTGGAACAG GAGCTGCCGG GAGATCCGAT TGTGGGTGAT CGGGTGAGCT TTGGCGCGGC GGACCTGATC GTGCGCGAAG TGGACGACCT CGGGCGGGTG ACGCAGGCCG GTCTGGCCTT CATGCGCCAC GGCGCCGGCG GCGACGGGCT CACGTTGCCG TGGTATGGCT GGTGGCGGGC CTTGCGCGGG CGGCGCGCCC GGGATCGGAA CCGTTAG
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Protein sequence | MDWIFPLIFI GAGLIVVSVL TSVLSFRLGA PLLLVFLGIG LLAGEDGLGL EFDDPNTAFL IGSLALAVIL FDSGFGTRLR TLRRAAGPAI VLATVGVALT TLLLGVAAHY LLDLPWAYAL LLGALISSTD AAAVFFLLRV GGVKINRRVR SILEVESGSN DPMAIFLTVV FIEWILSGTT VGGLATLFAT EFLWQMGLGL LLGVVGGYLL VELVNRLPLE EGLYPIAVMA GAVTLFALAG WLGGSGFLAA YVAGIVAGNR KLRGAAKLHR QQQGLTWLAQ ISMFLILGLL ATPSEFPSLA LPALALGLVL ILVARPLAVW LCLLPFRQDW RSTAFVSWVG LRGAVSILLA ILPMVAGIEG GELFFNIVFM MVLVSLLVQG WTIRPVAERL GLVVPPEIGP VERVQLELPG SPRHELAVYR VIEDSPVLRG ARLPRWARPS LVVREGRSVR YQQAGHLTPG DYVYIFVVPE HVPLLDRLFA SPRIPGHEDP EFFGELPLHP EKRLAELCEI YGVSCDAVDQ QLTIGAYLEQ ELPGDPIVGD RVSFGAADLI VREVDDLGRV TQAGLAFMRH GAGGDGLTLP WYGWWRALRG RRARDRNR
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