| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1826 |
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| Symbol | |
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| ID | 8807598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1939366 |
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| End bp | 1940025 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_003461053 |
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| Protein GI | 289208987 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.119174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00000680848 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTGTCC GACTTGTTCC CCGTCTGTTG CTCGCCCTGG CCGCGACGAC GATGTTCCTG
TTCGCCGGAC CGCTGGCGGC CGAGCGCGGC CCGGCACCGG ATGCGCGCGC GGCGCTGGAC
CGTTTTGTCG AGGGACTGGA GACCTTTACC GCCGAATTCA CGCAGACGGT GCGCGACGAG
ACGGGCTATG TGCTGCAGGA GTCGGATGGT TCGATGCAGC TGGGCATGCC CAACCGTCTG
CGCTGGGAGG TGACCGAGCC CTTCCCGCAG ACGATTGTCT CCGATGGCGA GGACCTGTGG
ACCTATGACC CGGACCTGGC GCAGGCGACC GTGCGCCCGC TGGGAGATGC CTTCGATGCG
ACACCGATCG CGGCGATCAC CCAGCCGGAG CGGCTGGACG AGCACTTCCG CATGGATGTG
CTGCCGGTAC GGGACGCCTC GGCGCTGCGC CTGCTGCTGA TCCCGCGCAA CGAGCAGGCG
GACTTCACCC ACCTCGAGCT GGACCTGACG CCGGATGGCG ATCTGACCCG CATGGCCTTT
CGCGACATCT TTGGTCAGGA GACCGAAATT CACTTCGAGC GAAGCGAGCG CAATGCGCCG
GTCGACGAGT CCGTGTTTAC GTTTGATCCG CCGTCCGGGG TGGATATCTA TCGGCCGTAG
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| Protein sequence | MTVRLVPRLL LALAATTMFL FAGPLAAERG PAPDARAALD RFVEGLETFT AEFTQTVRDE
TGYVLQESDG SMQLGMPNRL RWEVTEPFPQ TIVSDGEDLW TYDPDLAQAT VRPLGDAFDA
TPIAAITQPE RLDEHFRMDV LPVRDASALR LLLIPRNEQA DFTHLELDLT PDGDLTRMAF
RDIFGQETEI HFERSERNAP VDESVFTFDP PSGVDIYRP
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