Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1813 |
Symbol | |
ID | 8807585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1927984 |
End bp | 1928817 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003461040 |
Protein GI | 289208974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00112655 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000000103135 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCCGAC CCCTACGCCT GGAGTACCCG TGGGCGCTCT ATCACGTCAC CGCACGCGGC GACCGACGCG GATGGATCTA CCAAGATTCG GTCGATCATC AGCGATTTCT CGACACCCTG GCTCAAGCCG TACAACGGTA TAACTGGGTA CTGTCAGCGT ACTGCCTGAT GGGAAATCAT TATCACCTGC TCGTTGAAAC GCCGGACGCG AACCTCTCCC GCGGTATGCA GTGGCTCAAT GGCGTCTACA CACAGCGGTT CAACCGCAGG CATCGACGAG TGGGGCACGT TCTCCAGGGC CGATACAAGG CGATTCTGGT GGAACGCGAG TCCTACCTGC TCGAACTCGC GCGTTATATC GTACTTAACC CGGTCCGTGC CCATCTGGTC GCACGTCCTT CGGACTGGAA ATGGAGCAGT TACACTGCCA CCGCCGGGCA GGCCAGCGCA CCCACGTGGT TGACGACGGA TCGCGTACTC GACGAATTCG GACCAGAACC TTCAGCCGCC TATCAGCAAT TTGTCGCCGA GGGCATCGGG AAAGAATCCC CATGGGGCCA ACTGCACGCA CAGTTATATC TCGGCTCCGA GGATTTTATC GAACGTCAGC TATCCCATCG CCAAGGCGAA CCAGAAATTG AACATCCAAA AGCACAGCAA CGCCCCACAC CACCGCCACT CGACCAACTA ACAGCACGCT ATCCACGCAA CGAAGCCATC CAGCACGCCT ACGCCAGCGG TGGCTACACC CTCAAAACCA TCGGTGACTA CTTCGGGCTC CACCCGTCCC GCATCAGCCG CATCGCCGCA GGAAAGGCAA AAGGCAAGGT CTGA
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Protein sequence | MVRPLRLEYP WALYHVTARG DRRGWIYQDS VDHQRFLDTL AQAVQRYNWV LSAYCLMGNH YHLLVETPDA NLSRGMQWLN GVYTQRFNRR HRRVGHVLQG RYKAILVERE SYLLELARYI VLNPVRAHLV ARPSDWKWSS YTATAGQASA PTWLTTDRVL DEFGPEPSAA YQQFVAEGIG KESPWGQLHA QLYLGSEDFI ERQLSHRQGE PEIEHPKAQQ RPTPPPLDQL TARYPRNEAI QHAYASGGYT LKTIGDYFGL HPSRISRIAA GKAKGKV
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