| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1792 |
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| Symbol | |
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| ID | 8807564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1909303 |
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| End bp | 1910928 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | electron transport complex, RnfABCDGE type, C subunit |
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| Protein accession | YP_003461019 |
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| Protein GI | 289208953 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00273011 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTGC ACCGCTTCCA TGGAGGCCTG AAACTGGCCG ACGAGACCGA CGCCAGTACC
GCCGAGCCGG TGCTGGTGAT GGGTGTGCCT GCGAAACTGA CCGTTCCGCT CGGCCAGCAT
ATCGGCGAGG CGACCGAGGC CTGTGTCCAG GTCGGCGATC ACGTCACCAA GGGCCAGCGC
ATCGGTCAGT CCAAGGGCTA CATCGCCGCG CACGTGCACG CGCCCACCTC CGGCAAGGTG
GTCGATATCG ACCTGTACCC GGTCCCTCAT CCCTCGGGCC TTGATGCCCC CTGCGTGGTG
ATCGAGCCCG ATGGGCACGA CGATTGGGGC GATGCCCGCA TGGAGCCCTG GCTGGACTGG
GATACCCGCG ACCTGCGTGC GCTGCGCCAG CGCCTGCGTG CCGGCGGGAT CGTCGGACTG
GGTGGCGCGG CCTTCCCCAC GGCAGTCAAA CTGAACCCGC GCGCCGGCCA GCGCATCCAT
ACGCTGGTGG TCAACGGGGC GGAGTGCGAA CCCTACATCA GCGCCGACGA CATGCTGCTG
CGCACCGCTC CCGAGGCGGT GTTCGAGGGG ATTCGCATCA CCGCCCGCCT GCTGGGCGTG
GAGCGGGTGC TGTTCGCGGT CGAGGACAAC ATGCCGGAGG CGATGCGCTC GCTGACCGAG
ACCCTGCCCC CCGAGCTGCG CGACCTGATC GAGCTGGTAT CGGTCCCCTC GATCTATCCC
ACCGGGGGCG AACGCCAGCT GATCAAGGTA CTGACCGGCC AGGAGGTCCC GAGCGGCGGC
CTGCCCGCGG ATCTCGGGAT GGTCTGCCAC AACCCGGGCA CCTTCAAGGC GATCTGCGAC
ACGGTGATCC AGGGCCGACC GCTGCTGTCG CGTATCGTCA CCGTCACCGG CCCCGGTGTG
AAACACCCGC GCAATGTGGA AGCCCTGCTC GGCACCCCGT TCGCCGACGT GATCGAGGCG
GCCGGCGGCT ATGCCGAAGG CGTGGACCGG CTGGTGATGG GCGGCCCGAT GATGGGCTTC
GCGGTCCACG ACGACTCCAT TCCTGTGATC AAGGCCACCA ACTGCCTGCT CGCCACGCGC
CCCCAGGACA CGCCTGACCC CGGCCCGGTC ATGCCCTGCA TCCGCTGCGC CGAGTGCGCG
GCCGTCTGCC CCGCCCAGCT GCTGCCGCAG CAGCTCTACT GGCAGGCGAA AGCAAAAGAC
TTCGACGCGA TCCAGGACTA CGGGCTGTTC GACTGCATCG AATGCGGCTG CTGCGCCTAT
GTCTGCCCCA GCAACATCCC GCTGGTCCAG TACTACCGCT ATGCCAAGAA CGAGATCTGG
GCGCGGGAGA AGGAACGCCA CAAGTCGGAC ATCGCGCGCG AACGCTACGA ATTCCGCCAG
GAACGCATCG AACGCGAGGA GCGCGAGAAG GCCGAACGCC TGGCGAAGAA AAAGGCCGCT
CTGAAGAACA AGGAAGCCGA CGGCGACAAG CAGGCCGCGA TCCAGGCGGC ACTGGAACGC
GCCCAGAAGA AAAAGGCCGC CCGTGCGGAA GAGTCCGCGA AGGGTAGCGA TCAGGCACCC
GGATCGGAGA CGACCCGCGA GGAAACCTCC ACGACGAACG ACACCCGCGA CAGGGACGAC
CGCTGA
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| Protein sequence | MQLHRFHGGL KLADETDAST AEPVLVMGVP AKLTVPLGQH IGEATEACVQ VGDHVTKGQR
IGQSKGYIAA HVHAPTSGKV VDIDLYPVPH PSGLDAPCVV IEPDGHDDWG DARMEPWLDW
DTRDLRALRQ RLRAGGIVGL GGAAFPTAVK LNPRAGQRIH TLVVNGAECE PYISADDMLL
RTAPEAVFEG IRITARLLGV ERVLFAVEDN MPEAMRSLTE TLPPELRDLI ELVSVPSIYP
TGGERQLIKV LTGQEVPSGG LPADLGMVCH NPGTFKAICD TVIQGRPLLS RIVTVTGPGV
KHPRNVEALL GTPFADVIEA AGGYAEGVDR LVMGGPMMGF AVHDDSIPVI KATNCLLATR
PQDTPDPGPV MPCIRCAECA AVCPAQLLPQ QLYWQAKAKD FDAIQDYGLF DCIECGCCAY
VCPSNIPLVQ YYRYAKNEIW AREKERHKSD IARERYEFRQ ERIEREEREK AERLAKKKAA
LKNKEADGDK QAAIQAALER AQKKKAARAE ESAKGSDQAP GSETTREETS TTNDTRDRDD
R
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