Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1790 |
Symbol | |
ID | 8807562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1908111 |
End bp | 1908689 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | electron transport complex, RnfABCDGE type, A subunit |
Protein accession | YP_003461017 |
Protein GI | 289208951 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.335546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00906866 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGAATACG TCCTGATCCT CATCAGTACG ATCCTCGTGA ACAACTTCGT ACTGGTGAAG TTTCTGGGCC TGTGCCCGTT CATGGGGGTC TCGCGCAAGG TCGAGACGGC CACTGGCATG GGCCTGGCCA CGACCTTCGT GCTGACGTTG TCTGCGGTCA GCTCCTACGT CATTAACGAA TATCTGCTGC TCCCGCTCGG GCTCGAATAC CTGCGCACGA TCGCCTTCAT ACTGGTGATC GCGGCGGTGG TGCAGTTCAC CGAGCTGGTG GTGCGCAAGA CCAGCCCGCT TCTGTACAAC GTGCTGGGGA TCTTCCTGCC GCTGATCACG ACCAACTGCG CGGTGCTGGG CGTGGCCCTG CTGAACGTCC AGGAGGCCCA CAACTTCGTC GAGTCCGCGC TGTACGGCTT TGGCGCCGCG GTCGGCTTCT CCCTGGTACT GATCCTGTTT TCCGCCATTC GCGAACGCAT CGCGGTCGCG GACGTGCCCG TGGTCTTTCG CGGCAGCGCG GTGGCCATGG TCACGGCGGG CCTGATGTCG CTGGGATTCA TGGGCTTCTC GGGGCTGGTG CGGCTGTGA
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Protein sequence | MEYVLILIST ILVNNFVLVK FLGLCPFMGV SRKVETATGM GLATTFVLTL SAVSSYVINE YLLLPLGLEY LRTIAFILVI AAVVQFTELV VRKTSPLLYN VLGIFLPLIT TNCAVLGVAL LNVQEAHNFV ESALYGFGAA VGFSLVLILF SAIRERIAVA DVPVVFRGSA VAMVTAGLMS LGFMGFSGLV RL
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