Gene TK90_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1768 
Symbol 
ID8807540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1886668 
End bp1888008 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003460995 
Protein GI289208929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.197214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.508736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTT TGCCCCTGTG CCTCAACACC CTGCTCCTGG CGGGCGCCCT GTGTGCCAGC 
CCCACCCTGG CGCAAGAGAT CGCCGAAGAA ACCCCGGACG ATGCCCAGAC CGGCGCGGTG
TCAGCCGCCA CCGGCATCGA TGCGGGTGGC GCCGAGATAC CGGTCGAACG CTACCCCGCC
GATGGCAAGG CCGTGCTACT GTGGTTCCCG TCCGAGCACG GGCTGCTGGA CGGCCACCGG
CAGCAGGCCC TGGCGCTGCA GGCCGCGGGC ATCGAGGTCT GGCTGGCGGA CCCGTTTGCC
GGGCATTTCC TCCCGGAGGC CGCCTCCAGC TTCGACGAGA TGCCGACCGC AACCGTGGGC
GACCTGATCG AGGCCGCACA CGCGGAGGAC GAACGCGCGG TGTTCGTGTT CGGCAACGAC
CGCGCCCTGC CCTGGCTGCT CATGGGTCTG TATCAATGGC AGGAGGACCA TCCGGAGGCC
GAGCACCTCG CGGGGCTGCT CATGATGAGC CCGTACCTGC ATACCGGCGT GGACACCGAC
GAAGCCGAGA TGCAGCCCAT CGTCGGCGTC ACCAACCTGC CGGTCTACAT CATCCAGCCC
ATGCTCTCTC CACAGTTCCA GCACCTGGGC CTGATCCGTT CGGCCCTGAG CGACGGCGGC
AGCGCCGTCG GGGCACGCCT GCTGCCCGAG CTGCGTGACC GGTTCTTCTT CCGCCCCGAC
GCGATGGAGG CCGAGCTCCT GGCACGCGAG ATCTTCCACC AGGAGCTCGT CTACGGCATG
GACCTGCTGC GCCGCCTGCC GGCCGCGCGC ACCGCCGCCG CATCCGACGA CCGGGACCTG
AGCGTGAACA CGCCTACCGG CGGCGACGTC CAGCTGGATG CGCTGGACGA ACCGATCGCG
GCCCCCGAGC TGGTCCGCCC GGACCTGGCC GGCGAGGAGC ACCGTCTGGA GGATTATCGT
GGCGAGGTCG TGCTGATCAA CTTCTGGGCC AGCTGGTGCC CGCCCTGCGT GCACGAAATG
CCGTCCATGC AGCTGCTGGA AGACGAGCTG CGCGAAGAGG GCTTTCGCAT CCTCGCGGTG
AATCTTGGCG AAGACGAAGA GACCATCCGC GACTTCATCG AGAACGAGGT GCAAACGGAG
TTCACCATCC TGCTCGACCC GAACCAGGAG TCGCTGAACG ACTGGCGCGC GATGGCCTAT
CCCACCAGCT ATGTCGTCGA CCGCGAGGGC AACCTGCGCT ACTACCTGTT CGGCGCGATC
GAGTGGACCG AGCCCGGCGT CGTCGACCAG ATGCGCGAGC TGCTCGAGGA AGACTACGAA
GCCCCGGAAG GCGACGACTA G
 
Protein sequence
MIRLPLCLNT LLLAGALCAS PTLAQEIAEE TPDDAQTGAV SAATGIDAGG AEIPVERYPA 
DGKAVLLWFP SEHGLLDGHR QQALALQAAG IEVWLADPFA GHFLPEAASS FDEMPTATVG
DLIEAAHAED ERAVFVFGND RALPWLLMGL YQWQEDHPEA EHLAGLLMMS PYLHTGVDTD
EAEMQPIVGV TNLPVYIIQP MLSPQFQHLG LIRSALSDGG SAVGARLLPE LRDRFFFRPD
AMEAELLARE IFHQELVYGM DLLRRLPAAR TAAASDDRDL SVNTPTGGDV QLDALDEPIA
APELVRPDLA GEEHRLEDYR GEVVLINFWA SWCPPCVHEM PSMQLLEDEL REEGFRILAV
NLGEDEETIR DFIENEVQTE FTILLDPNQE SLNDWRAMAY PTSYVVDREG NLRYYLFGAI
EWTEPGVVDQ MRELLEEDYE APEGDD