Gene TK90_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1720 
Symbol 
ID8807492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1840521 
End bp1841618 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content67% 
IMG OID 
Productglycine cleavage system T protein 
Protein accessionYP_003460947 
Protein GI289208881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.845128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGA AGAAAACGCC GCTTCACGCC GCGCACCAGC GCGCCGGGGC CAAGCTGGTC 
GACTTCGCCG GCTGGGAGAT GCCGCTGCAC TACGGCTCCC AGATGGAGGA GCACAAGATG
GTGCGCGCCG GGGCCGGTAT GTTCGATGTC TCGCACATGC AGGTCGTCGA TATCCACGGC
CCGCAGGCGC AGGCCTTTCT GCGCTACCTG CTGGCCAATG ACGTCGCCAA GCTGAAGACC
GAGGGTCGCG CCCTGTACAG CTGCATGCTG AACGAGGCCG GTGGCGTGAT CGACGACCTG
ATCATCTACT GGACCGGGGG CGACAGCTAC CGCGCCGTAG TCAATGCCGC GACCGCCGAG
GGCGATATCG CCCACATGCA GCAGGTGGTA AAGGGCTTCG ACGCGAACGT CGAGCCGCGC
CCGGAGTTCG CGCTGATCGC GATCCAGGGC CCGCAGGCGG TGGAGAAGAC GCTGCCGCTG
CTGCCGGAAG ACCTGCGCTC GGCCGGCGAT CTCAAGCCGT TCTCCGCCGT CTGGAACGAC
TCCTGGTTCG TTGCCCGCAC CGGCTACACC GGCGAGGACG GCTTCGAGGT GATGCTGCCG
GAAGCTGAGG CCGACGGCTT CTGGGAACAG CTGAAGGACG CCGGTGTGAA CCCGATCGGC
CTGGGTGCGC GCGACACGCT GCGCCTGGAG GCCGGCATGA ACCTCTACGG CACGGATATG
GACGACCAGA CCAATCCGCT GACCGCGAAT CTCGGCTGGA CCATCGCCCT GAAGGACGCC
GAGCGCGACT TCATCGGCCG CAAGGCCATC GAACAGTGGA AGGCCGAGGG TGTGCCGGAG
CGCATGGTCG GGCTGGTGCT CGAGGGTCGC GGCGTGCTGC GCGGCGGCAC CCGTATCGAG
ACCGCGGCCG GCGACGGCGT GGTGACCTCC GGCAGCTTCT CGCCGAGCCT CGGCGTGTCG
GTTGCGTTTG CGCGCATCCC GGCCGCGGTG GATGCCGAGG AACTGCAGGC CGACATCCGC
GGGCGCATGC TGCCGGTGCG GGTGGTCAAG CCCGTATTCG TGCGTAACGG CGAGCCACAG
ATCGAACTGA ATCGCTAG
 
Protein sequence
MTLKKTPLHA AHQRAGAKLV DFAGWEMPLH YGSQMEEHKM VRAGAGMFDV SHMQVVDIHG 
PQAQAFLRYL LANDVAKLKT EGRALYSCML NEAGGVIDDL IIYWTGGDSY RAVVNAATAE
GDIAHMQQVV KGFDANVEPR PEFALIAIQG PQAVEKTLPL LPEDLRSAGD LKPFSAVWND
SWFVARTGYT GEDGFEVMLP EAEADGFWEQ LKDAGVNPIG LGARDTLRLE AGMNLYGTDM
DDQTNPLTAN LGWTIALKDA ERDFIGRKAI EQWKAEGVPE RMVGLVLEGR GVLRGGTRIE
TAAGDGVVTS GSFSPSLGVS VAFARIPAAV DAEELQADIR GRMLPVRVVK PVFVRNGEPQ
IELNR