| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1715 |
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| Symbol | |
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| ID | 8807487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1833819 |
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| End bp | 1836194 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003460942 |
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| Protein GI | 289208876 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.680174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA TTTGTGCGGC CCACGGCTAC GCCGCGCTGT TCGAGCATGC CCCGGTTGGG
CTGGCCGAGA TGGACACGGA GGGGCGCATC CTGCGCGCGA ACCCGCGTCT GGGGGAGATG
CTGGCCTGCG ACCCTGGGGA TCTGGTCGGG GGATGGTTGC GCGAGCGCCT GCTCCCCGAG
GATGTCGAGC CCTGCGAGGC GCGACGCCGC GGTCTGCTTG ACGGTGGCTG CCCCAACTGC
CAGGTCGAGG TTCGCCTGGT GGACGCCACA GGCCTTGCCC GCTGGGTCGA GATCAGTATC
AGCCGTATCC CCGCGACGAT TGATAGCCCG GAGGCGCTAC TGGCGGCTGT TGCCGATATC
GGTACGCGCA AGCAGGCCGA GCAGCGCATG GACAGCCTGT TGCATGCCAG CCCCGCGGTG
ATCTACACCA TGCATCCGGA CAACCTCGGC ACCATGACCT GGCTCAGCCG CAACTCGGTC
TCGGTGACCG GTTGGGCCCC GGAGCAGATC AGCTCGAATC CGGACTGGCT GACAACCCAC
ATCGCCCCGG AGGACTATGG CCGCTGCGTC TGTCAGGTGC GGCGCTGGCT GTCCGACGGG
GCCCAAGGGT TCTGCCGCCT GAACTACCGC CAGCGGATGC CCAACGGCCA CTGGCAGTGG
CTGGAGGACC AGATCACCGC CATTCGTGAT GCAACCGGTG CGGTGACCGA ACTGGTGGGT
GCTTTTCAGG ATATCGGCGC GCGCGTCGAG ACCGAGCGAC ACCTGGAAAA GATCGCCCGC
AACCTGCCCG GCGTGATTTA CCAGTACCGC CAGCACCCCG ACGGGCGTGG CTGCTACCCA
TACGCTAGCG AGGGGATGAC CGATATATTC GGGATTGCAC CCGAGGAGGC GATGCGCGAT
GCCGAGGCGG TGTTCCGCGT GATCCACCCG GAGGACGTGG AACGCATCCG CGCGAGCATC
GAAGCGTCGA TGCGATCGCT GGAACCCTGG TTGCAGCGCT ATCGCGTGAT GAGTCCCGAA
CGCGGCGAGA CCTGGCTGGA GGGCCACGCG AGTCCGGAGG CTCTGGACGA CGGGAGTGTG
CTCTGGCACG GCGTGATCCT GGACATCACG CAGCGGGTGC GCGCCGAGCA TGCTCTGCAC
CGAAGTGAGC AGGAACTGGC CCTGGCACAA AGCATCGCGC ATGTCGGCAA CTGGATCAGT
GATTTCCAGA AGCACGAGAT TCGCTGGTCG GACGAGGTCT ATCGCATCTT CGGGATGGAA
CGATCCCGCT GGGAGGGCAC GCATGGGGCG TTCATGCAGG CGGTCCACCC GGGGGACCGT
GAACGCGTAC AGGCGGCGGT AGACCGAGCC CTGGCTGGTC TGGAGCAGTT CGATGTGACC
CACCGCATCC TGCGGCCGGA CGGTACAGAG CGCGTGGTGC GCGAGCTAGC CTCCGTGGAG
CTCAGCCCCT GCGGCACGCC CGCGCGCATG GTCGGCACGG TGCAGGATAT TACCGAGCAG
TATCACCTCG AACAGGAGCA GCGTCTGCTG GCCGCGACCT TCGAGTCCAG CCAGGCCATC
TTCATCACGG ACGTTGAGGG CACCATCCAG CGTGTGAACG CAACGTTCAC GCAGCTCACG
GGATATACCG AAGAGGAGGC CGTGGGGGCA AATCCGCGCA TCCTGAATTC CGGGCGCCAG
GATCGCGACT TCTACCAGGA GATGTTCCGC ACGGTGCGCG AGACGGGCCA CTGGCAGGGC
GAGATCTGGA ATCGCCGCAA GAATGGCGAG ATCTTCCCCC TGCACGAGGT CGTTACCGCG
ATCCACGACG ATCAGGGCGA GATCGAGTAC TACATCGCGA TGTTCCACGA CATCACGCGG
CAGAAAGAAC TCGAGGCCGC CCTGGAGCAC CAGGCTTTCT ACGACCCGCT GACCGATGCC
GCCAACCGTG GCTACTTCGA GACGCTCCTG GATCAGGAGG CGCGCCGTGC GCAGCGTTAC
GCGCATCCCT GCTCGCTACT GCTGCTGGAT ATCGACCACT TCAAGCGTAT CAACGATACG
TTCGGCCACG AGGTGGGCGA CGAGGTCCTG CGCTTCCTGG TGCATGCCCT GAAGGGTCGT
CTGCGCGAGG CGGATGTACT GGGACGCTGG GGTGGCGAGG AGTTTGTGGT CCTGCTGCCC
GGAACGGACG CGGAGCGTGG CCAGCATGTG GCCGAACAGC TGCGCGAGCA GGTCACTGCT
ACGGCATTCC CCTGTGTGGG CCTTGTGACG ATTAGTCTGG GGGTTGCGGA GTGCCGCCCC
GGTGAGTCGA TCAGGGACTG GGTGAAGCGA GCGGACGAGG CCATGTACGT GGCCAAGAAG
GGCGGGCGCA ATCGGGTCGT GCGGCTGGAT GATTGA
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| Protein sequence | MTEICAAHGY AALFEHAPVG LAEMDTEGRI LRANPRLGEM LACDPGDLVG GWLRERLLPE
DVEPCEARRR GLLDGGCPNC QVEVRLVDAT GLARWVEISI SRIPATIDSP EALLAAVADI
GTRKQAEQRM DSLLHASPAV IYTMHPDNLG TMTWLSRNSV SVTGWAPEQI SSNPDWLTTH
IAPEDYGRCV CQVRRWLSDG AQGFCRLNYR QRMPNGHWQW LEDQITAIRD ATGAVTELVG
AFQDIGARVE TERHLEKIAR NLPGVIYQYR QHPDGRGCYP YASEGMTDIF GIAPEEAMRD
AEAVFRVIHP EDVERIRASI EASMRSLEPW LQRYRVMSPE RGETWLEGHA SPEALDDGSV
LWHGVILDIT QRVRAEHALH RSEQELALAQ SIAHVGNWIS DFQKHEIRWS DEVYRIFGME
RSRWEGTHGA FMQAVHPGDR ERVQAAVDRA LAGLEQFDVT HRILRPDGTE RVVRELASVE
LSPCGTPARM VGTVQDITEQ YHLEQEQRLL AATFESSQAI FITDVEGTIQ RVNATFTQLT
GYTEEEAVGA NPRILNSGRQ DRDFYQEMFR TVRETGHWQG EIWNRRKNGE IFPLHEVVTA
IHDDQGEIEY YIAMFHDITR QKELEAALEH QAFYDPLTDA ANRGYFETLL DQEARRAQRY
AHPCSLLLLD IDHFKRINDT FGHEVGDEVL RFLVHALKGR LREADVLGRW GGEEFVVLLP
GTDAERGQHV AEQLREQVTA TAFPCVGLVT ISLGVAECRP GESIRDWVKR ADEAMYVAKK
GGRNRVVRLD D
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