Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1714 |
Symbol | |
ID | 8807486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1831016 |
End bp | 1833778 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_003460941 |
Protein GI | 289208875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.183434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.382108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCA CGGAAGGCGC CGACCCCATT CAATGCGAGC ACATTGCAGT AGGCCTGGCC CGCCTCGACG CGGCCGGTGC CATCTGCACG GTCAATGCCC GCCTGGCTGA GTGGCTCGAG TGCTCGCCGG CTGATCTGCA GGGCAGTGCA CTGGTGGACT GCATCGCGCC CGAACAGCGG CCATCGCTGG CGGACGCGTT GCAGCGTTCG GCCACATCCG AGGTGACCCT GAGCGTGGAC ATGCTCGCGC CGGCTGCACC GGAAGGGGCC TCGCTCTCCT GTACGTTGAC GCTGGTGCCG GATGACGATG GGCGCGTCGT GACCGTTCAG CGCAGGCCCG GAGGCGATTC TGCAGCCCAG GTCTACGAGC AGACGTTTAC CGCCAATACC GCACCGAAGC TGCTGATCAA CCCGGCGGAT GGCCGGATTG TCGATGCCAA CCCCGCCGCG GTGAGCTTCT ACGGCTATTC GGCCGACACC CTCAAGGGCA TGTATATCCA CGACATCAAC ACGCTGTCGG CGGAAGACGT GCGGGTCGAG ATGCAGCGTG CCAGGAGCGA GGAACGCCGG TATTTCCGGT TCCGCCATCG CATCCAGGGG GGCGAGATCC GCGAGGTCGA GGTGTACTCC GGCCCGGTGG TGCTGGACGG AACCACCTAC CTGTATTCGA TTGTTCACGA TGTCTCCGAG GCCCGGCGCT ACGAGCGCGA GCTGGAGTTC TACGGGGGCG TGTTCCGGCG TCTTCCGGTG GGCGTCTACC GCAACACGCC CGGGCCGGAA GGCCGCCTTG TCTGGCTCAA TCCGGCGATG GTGGCGCTGT TTGAGGCCGA GTCCGAGGCA CAGCTGCGCG CAACCCCGGT GCAAGACCTG TATCGCGATC CGGGCGCGCG CGAGGCATTC AGCCGCGATC TGGAGATGCA CGGTCGCGTG GTCGGGCGCG AACTGGACCT GCAGACACTG CGTGGTCGGG CCTTTCGGGC GCGCGTGACC GCGTATCGCA GCCATGACGA GGACGGCGAG CCCGTGTTCG ATGGCGTGAT CGAGGACGTC ACCGAGGTGC GCGCGGCCGA GGCTTTTCAG AACCACCTTC TGGCGAGTCT GGCGGAAGGT GTCTTCGGAC TGGACCGTTA CGGCCGCTAC ACCTTTCTCA ACCCGGCGGC CTGCCGTCTG TTGGGTTTCA AAAGCGAAGC CGAGGCACTC GGGCGCGACG CCCATTCAAC CAACCATCAC TCGTTGGTGG GCGGGGAGCC CTATCCCAAA GAAGCCTGCC CGATCCTGCG GGTCCTGGAG GCTGGCCAGT CGGATGAACC CTGGGACGAC TATTTTGTGC GGACCGATGG CTCCCATTTT CCGGTGAGCG TCTTTGCGGC GCCGACGTTT GATGCGGCCG GTCGGGTCGA TGGTGTGGTG GTGTCGTTCC AGGACCAGAC CGCACGGACG GAAAGGGAGG TTCAACTGAC CAAGGCCACC GCCCATCTGC CCGGGGCGAT CTACCAGTAC CACCTGTATC CGGATGGGCG GCACGCGTTT CCGTTCGTCA GTGATGGGAT ACGGCGCGTG TTCGGGCTCA GCCCGGGGCT GGTTCAGGAC AGCGCGGACG CGGCCTTTGC AACGGTACAC GCGGATGACC GGCCTCGCAT CCAGGCCAGC ATCGAGGAAT CGGCGCGGTC CATGGAACCC TGGCGGGTTC GCTTCCGCGT TCGCCACCCG CTGCGCGGAA CGATCTGGGT CGAGGGTCGT GCGACGCCCG AGGCACGTGC CGATGGAGGC ATCGTCTGGC ACGGTGTGAT GATCGACATT ACCGAGCAGG TGGCGATGGA AGATGCCCTG CGCGAGCGGG GCCGGGAACT GGCCGCTGCG CAGCGCATCG CGCACGTGGG CAGCTGGGTC TGGGAGATCC ACGAGGACCG CACCCGCTGG TCGGACGAGG TCTATCGCAT CTTCGGCCTC AGGCGGGGTG AGCAGGAAGC CAACTACGCG GGGTTTCTGC ATGCCGTGCA TCCCGAGGAC CGGCGCGATG TGGCAAAGAC AGTAGGGGCA GCACTGGAGA GCGGCGATTA CGATATTCAT TTTCGGATCC TGCGCCCCGA TGGGCAGGAA CGAGTGGTCC ATGCGCGCGG TACGGTCGAG GGCGATGACA ACGGCAAGCC ACGTCGTCTG ATGGGAACTG TGCAGGACGT GACCGAGCGG CGCGCCCTGG AGGAAAACCA GCGCCGTCTG GTCGGGATCC TGGAACATAC GCCCGACGTG GTCGCCATGC ATGGGCCCGC TGGCGACATG CAGTTCCTGA ACGCCGCCGG TCGCCGCCTG TTTGGTCTGC CGCCCATGAC GGGCGAACCG TGGACCCCCG AGAACGGCTG GAATACCTGG GGGCTGCCGC CCGAAACCCG CTCGGTCGAG AGTGCCGTCC AGCGGTTCCA TCCACCTTGG GCGGCCGAGC GCATCGTGAA CGAGGCCGCT CCGATTGCGA TGCGCGACGG GGTCTGGGAA GGCGAGACGG CGATACTGGA CGGACAGGGC AGGGAGATCC CGGCTTCACA GGTGATTATT GTTCGCCGCG ACGACCAGGG CGAGATCCGG CAGGTGTCGA CCATCCTGCG CGACCTCTCG CAGCGCAAGG CAGTAGAAGA GGCCCTGCGC GAGAGCGAGG CGCGCTTCCG CCAGCTGGCG GGCAGCGTGA ACGAGGTGTT CTGGCTACAG GACGAAGACA GGGATCCTGT ACGTGAATCC GGCCTTCGAG CGGATCTGGG GGCAAAGCCG TGA
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Protein sequence | MASTEGADPI QCEHIAVGLA RLDAAGAICT VNARLAEWLE CSPADLQGSA LVDCIAPEQR PSLADALQRS ATSEVTLSVD MLAPAAPEGA SLSCTLTLVP DDDGRVVTVQ RRPGGDSAAQ VYEQTFTANT APKLLINPAD GRIVDANPAA VSFYGYSADT LKGMYIHDIN TLSAEDVRVE MQRARSEERR YFRFRHRIQG GEIREVEVYS GPVVLDGTTY LYSIVHDVSE ARRYERELEF YGGVFRRLPV GVYRNTPGPE GRLVWLNPAM VALFEAESEA QLRATPVQDL YRDPGAREAF SRDLEMHGRV VGRELDLQTL RGRAFRARVT AYRSHDEDGE PVFDGVIEDV TEVRAAEAFQ NHLLASLAEG VFGLDRYGRY TFLNPAACRL LGFKSEAEAL GRDAHSTNHH SLVGGEPYPK EACPILRVLE AGQSDEPWDD YFVRTDGSHF PVSVFAAPTF DAAGRVDGVV VSFQDQTART EREVQLTKAT AHLPGAIYQY HLYPDGRHAF PFVSDGIRRV FGLSPGLVQD SADAAFATVH ADDRPRIQAS IEESARSMEP WRVRFRVRHP LRGTIWVEGR ATPEARADGG IVWHGVMIDI TEQVAMEDAL RERGRELAAA QRIAHVGSWV WEIHEDRTRW SDEVYRIFGL RRGEQEANYA GFLHAVHPED RRDVAKTVGA ALESGDYDIH FRILRPDGQE RVVHARGTVE GDDNGKPRRL MGTVQDVTER RALEENQRRL VGILEHTPDV VAMHGPAGDM QFLNAAGRRL FGLPPMTGEP WTPENGWNTW GLPPETRSVE SAVQRFHPPW AAERIVNEAA PIAMRDGVWE GETAILDGQG REIPASQVII VRRDDQGEIR QVSTILRDLS QRKAVEEALR ESEARFRQLA GSVNEVFWLQ DEDRDPVRES GLRADLGAKP
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