Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1700 |
Symbol | |
ID | 8807472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1817769 |
End bp | 1818902 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003460928 |
Protein GI | 289208862 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0414346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC CCCGCTCGTC CCTCGTGTCT ATCAAGGACA CGCCCTGGTA CCACGTCGTC TCCCGCTGCG TTCGGCGCGC CTTTCTCTGC GGCGAGGATC GCGTATCCGG ACACAACTTC GAGCATCGCC GCGAATGGAT CGAGACGCGG ATCCTGGAGC TGGCGGCGAT CTTCACCATT GATGTCGCAG CCTATGCGGT GATGAGCAAT CACTATCACG TTGTAGTTCG ACTGGACCCC GAGCGGGCGG CCGCGCTGGA TACCGAGTCC GTCCTGCGTC GCTGGACGCG CCTGTTCTCT GGCCCCGAGT TGGTTAGACA GTACCTGTCG CCTCGGCGGA AGGCGATGTG CGCCGCACAG GTTCGGCGGG TCGAGGAATA CGCCCAAACC TATCGGGCCC GACTGGCCGA TCTGTCGTGG TTCATGCGCG TGTTGAACGA GTCCATTGCC CGACAGGCCA ACGAGGAGGA AGGCATCAAG GGACGATTCT GGGAGGGCCG CTTCAAGAGT CAGGCGCTGC TGGATGATGC CGCCGTGCTG ACGGCCATGA GCTACGCGGA CCTGAACCCG ATCCGGGCCG GGATGGCCGA GACGCTGGAC GAGAGTGACC ACACGTCACT GCAACGGCGT CTCCGCCAGG AGGGGACCGA GGCAGACGCA CAGACCGGGG CAGTTGCGAC TCCAAATGGG CCCCAGCCAT GCGGTCCACC AGATGCCTTG CGCCCGGAGA ATGAGCTTCG ATCGCTTCCC CAGGCGCCCC TGATGCCGTT TGATGCAACC GGGCAGTTCG AACCGGCTAT TCCGTTCGCA TTCGAGGATT ACCTGGAGCT GACCGATACG CTGGGGCGTT GCGTCCACCC CACGAAACGG GGATGGATTC CGGCGCACCG TCCTCGCCTG CTAGACCGCT TGAGCATGGA TGCCGAGACT TTTATCCAGC AATCCAGCAG TCTATTGCGC GCGTTCGGAT CGGCGATTGG CGCACCAGAG CAGTTGGTGG ATTTGGCCGC GCGCAGACAG TGCCGCTACC TGCGCGGGAT GTCCATGGCT CGGGCGCTGT TCGCCCGCCC CGCCGCTTTG GCGCCGCACC TCACACTCCA ACGCAGGTTT CGGGCCAGGC ATTCGGGTTT GTGA
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Protein sequence | MTQPRSSLVS IKDTPWYHVV SRCVRRAFLC GEDRVSGHNF EHRREWIETR ILELAAIFTI DVAAYAVMSN HYHVVVRLDP ERAAALDTES VLRRWTRLFS GPELVRQYLS PRRKAMCAAQ VRRVEEYAQT YRARLADLSW FMRVLNESIA RQANEEEGIK GRFWEGRFKS QALLDDAAVL TAMSYADLNP IRAGMAETLD ESDHTSLQRR LRQEGTEADA QTGAVATPNG PQPCGPPDAL RPENELRSLP QAPLMPFDAT GQFEPAIPFA FEDYLELTDT LGRCVHPTKR GWIPAHRPRL LDRLSMDAET FIQQSSSLLR AFGSAIGAPE QLVDLAARRQ CRYLRGMSMA RALFARPAAL APHLTLQRRF RARHSGL
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