Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1674 |
Symbol | |
ID | 8807446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1792871 |
End bp | 1793716 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | 20S proteasome A and B subunits |
Protein accession | YP_003460905 |
Protein GI | 289208839 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTACT GTGTCGCCAT TGATCTGGAC GACGGCCTCG TGTTCGCCTC CGACTCGCGC ACCAACGCCG GGGTCGACCA GGTCAGCACC TACAGCAAGA TGCACACCTT CGAGGTCGAA GGCCAGCGCC TGTTCGTCGT GCTGACCGCC GGGAACCTGG CCACCACGCA GGCGGTGGTA AACCGGCTCA AGCGCGACAT GGAAGACAAT GCCGAGGAAA GCCTGGCGAC GGTGGAACGC ATGTCGGATG CCGCCGAGTA TCTGGGGCGC CTGAACCGCG AGGAGACCGA AAAGCACTCC GAGGCGCTGT CGCGTTCCGG CATGCAGGCC GATGCGACCC TGATCATCGG CGGCCAGATC GCCGAGGATC CCCCTGGCGT CTACCTGATC TACCCCCAGG GCAACTACAT CACGACCTCG CAGCAGACCC GGTTTCTGCA AATCGGCGAG AGCAAGTACG GCAAGCCGAT CCTCGATCGC ATCATCTCGC ACGACACCGG GCTCGGCGAC GCGGCCCGCT GTGCGCTGGT GTCGATCGAC TCCACCATCC GCTCCAACCT GACCGTCGGC CCGCCGATCG AGGTCCTCGT CTACGAGCGC GGCACCCTCG ACTTCGACCA CTACCTGTGC CTGGAGGCCG ACGACGAGTA TCTGCGCTCC CTGACACAGG CCTGGGACGC AAACATCAAG CGCGCCTTTA CCGACCTGCC CCGCTTCGAC TGGGAAGGCA CGCACGGACG CAAGCAGCGC GGGACGCGGG TCAGCCGCGG GTCCGCCAAA ACCGGCGGCG GCAAGACCAG CACCACCAAG GCCAGCACCA GCAAGCCCAA AAAGCCCCGC CGCTGA
|
Protein sequence | MTYCVAIDLD DGLVFASDSR TNAGVDQVST YSKMHTFEVE GQRLFVVLTA GNLATTQAVV NRLKRDMEDN AEESLATVER MSDAAEYLGR LNREETEKHS EALSRSGMQA DATLIIGGQI AEDPPGVYLI YPQGNYITTS QQTRFLQIGE SKYGKPILDR IISHDTGLGD AARCALVSID STIRSNLTVG PPIEVLVYER GTLDFDHYLC LEADDEYLRS LTQAWDANIK RAFTDLPRFD WEGTHGRKQR GTRVSRGSAK TGGGKTSTTK ASTSKPKKPR R
|
| |