Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1669 |
Symbol | |
ID | 8807441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1789186 |
End bp | 1789767 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003460900 |
Protein GI | 289208834 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.7266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.851284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACTTCA CGATGGAACG TGGCACGGGC CTTGAGCCGC ATCTGGAGGC CATCGCGCGG CTGCGTATCG AGGTCTTTCG CGAGTGGCCC TACCTGTACG AAGGTTCCGT CGAGTACGAG CGGGACTACC TGGTCGACTA TGTCCGCTGC CCGCAAAGCG CGGTGGTGCT CGCCTGGGAG GGCGACGAAC TGGTGGGCGC GTCGACCTCG CTGCCGCTGG CGGCGGCCGA CGCCGATTTT CAGGCTCCTT TTGTTCAGAA CGGACTGGAT CCCGAGCGCT ATTTCTATCT CGCGGAGTCG GTCCTGCGGC GACCGTATCG GGGCCGGGGT GCCGGGCACT ACTTCTTCGA TGCCCGCGAG GCCGCGGCGC GTGAGTCAGG CTATAGGCAG GCGACCTTCT GCGCCGTCAT CCGCCCGGAC GATCATCCGG CACGCCCGGC GGGCTATCGC CCGCTGGACG GCTTTTGGCG CAAGCGTGGC TACGAACCTG CCGAAGGGCT CGTATGCCAT TACCACTGGC CGGATCTGGG CGAGGACGAG GAGACCTGGA AGCCGCTCCA GTTCTGGTGG CGGTCACTCT AG
|
Protein sequence | MDFTMERGTG LEPHLEAIAR LRIEVFREWP YLYEGSVEYE RDYLVDYVRC PQSAVVLAWE GDELVGASTS LPLAAADADF QAPFVQNGLD PERYFYLAES VLRRPYRGRG AGHYFFDARE AAARESGYRQ ATFCAVIRPD DHPARPAGYR PLDGFWRKRG YEPAEGLVCH YHWPDLGEDE ETWKPLQFWW RSL
|
| |