Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1598 |
Symbol | |
ID | 8807369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1704183 |
End bp | 1706006 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | excinuclease ABC, C subunit |
Protein accession | YP_003460831 |
Protein GI | 289208765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.735187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCGAGACCGG ATTCGATTCC AAGGCCTTCC TGAAGACGCT GACGCAGTCG CCCGGTGTCT ATCAGATGCT GGATGCCAGC GGCGGCGTGC TGTACGTCGG CAAGGCGCGC AATCTCAGGA GTCGTGTGGC CAGCTACTTT CGCGGTTCGG ACGATCGCGG GCCGCGGATC CGGTCGATGG TGCGTCAGAT CGCGGACATT CGTGTCGCGG TCACGCATAC CGAAGCCGAG GCCCTGCTGC TCGAGGCCAA CCTGATCAAG CGCCACCGGC CGCGTTACAA CGTATTGCTG CGGGACGACA AGAGCTACCC CTACATCTTC GTGTCGAATC AGGATTATCC GCGGCTCGGG TTTCACCGGG GCGCGAAGAA GAAGGGGGTG CGGTACTTCG GGCCCTATCC CTCGGCCGGG GCGGTGCGCG AGAGCCTGGC GCTGCTGCAG AAGCTGTTTC AGGTGCGTCA GTGCGAGGAC AGCGTGTTCG CGCACCGCTC CCGGCCCTGT CTGCAGTATC AGATCGGGCG TTGTACGGCG CCCTGCGTGG GCTACATCAC GCCCGAAGAG TATGCCCGCG ACGTCGAGTC TTCCGTGCAG TTCCTGCAGG GCAAGAGTGA GGTGGTGATC GCCGACCTGA TGCAGCGCAT GGAGGCGGCC TCCGAACGTC TCGACTTCGA GCATGCGGCG CGGCTGCGGG ACCAGATTGC GCGGCTGCGC CAGATCTCCG AGCAGCAGTT TGTCTCCGGC GGCGAGGGCG ATGCCGACGT GATTGCGCTG GCACAGGAGG CGGGCGTGGT GGCCGTGGAG ATCTTCTTTG TGCGCGGGGG GCAGAACCTG GGCAACCGCG AACTGTTCCC GAACGTGCCG GAGGCCACTG ACACCGGCGA GATCATGGCG GCAGTGCTGG CGCAGTACTA CGCCGAACGC GACCCGCCGG CGCGCGTGTT GCTGTCGCAC GAGCCGGAAG GTGCGTCGGC GCTGGAGGCC TTCCTGTCGG AGCGGCGCGG GGGCCGCAAG GTCCAGCTTG CCTGGTCGCT GCGCGGCGAC CGCGCGCGCT GGCTGGACAT GGCGCGGCGC AATGCCGAAC TGGCCCTGAA GACACGCATC GCCAGTCAGG CCGGGCAGAC CGCGCGCCTG GACGCGCTCA CCGCCGAACT GAACCTGGAG AGTCCGCCCA AGCGCATGGA ATGCTTTGAT ATCTCGCACA CCGGGGGCGA ACGCACGGTG GCCTCCTGCG TGGTGTTCGG GCCTGACGGG CCGATCAAAT CCGACTATCG GCGGTTCAAT ATCGACGGCA TCGAGCCCGG CGACGATTAC GCCGCAATGC ATCAGGCGCT GAGCCGGCGC TTCGCCCGCC TGAAGAAGGG GGAAGGTCAG GAGCCGGACA TCCTGTTCAT CGATGGTGGC AAGGGGCAGG TCACGCAGGC GCTCAATGTG CTGGCGGACC TCGGGCTCGA TCACATCCGC GTGATCGGCG TCGCCAAGGG CGAGGAACGC CGGCCGGGTA TGGAAACTCT GATATTGAGC GGGGTCGAGG CCCCCTCTAT ACTCCCGGCG CACTCGGGTG CCCTGCACCT GATCCAGCAG ATCCGCGACG AGGCCCATCG ATTCGCGATT ACCGGGCACC GTGCGCGCCG GGCCAAGGCC CGGAAGGAAT CGACCCTGGA GGCGATCCCG GGGCTGGGGC CGAAGCGCCG CAGTGCGTTG CTGCGCCACT TCGGGGGGCT GCGCGGGGTG GCCCGGGCCG GCGTCGACGA GCTGACCAAG GTGCCGGGTA TCCACCGGCG GCTCGCGCAG GCGATTTACG ACCAGTTTCA CTAG
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Protein sequence | MSTPETGFDS KAFLKTLTQS PGVYQMLDAS GGVLYVGKAR NLRSRVASYF RGSDDRGPRI RSMVRQIADI RVAVTHTEAE ALLLEANLIK RHRPRYNVLL RDDKSYPYIF VSNQDYPRLG FHRGAKKKGV RYFGPYPSAG AVRESLALLQ KLFQVRQCED SVFAHRSRPC LQYQIGRCTA PCVGYITPEE YARDVESSVQ FLQGKSEVVI ADLMQRMEAA SERLDFEHAA RLRDQIARLR QISEQQFVSG GEGDADVIAL AQEAGVVAVE IFFVRGGQNL GNRELFPNVP EATDTGEIMA AVLAQYYAER DPPARVLLSH EPEGASALEA FLSERRGGRK VQLAWSLRGD RARWLDMARR NAELALKTRI ASQAGQTARL DALTAELNLE SPPKRMECFD ISHTGGERTV ASCVVFGPDG PIKSDYRRFN IDGIEPGDDY AAMHQALSRR FARLKKGEGQ EPDILFIDGG KGQVTQALNV LADLGLDHIR VIGVAKGEER RPGMETLILS GVEAPSILPA HSGALHLIQQ IRDEAHRFAI TGHRARRAKA RKESTLEAIP GLGPKRRSAL LRHFGGLRGV ARAGVDELTK VPGIHRRLAQ AIYDQFH
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