Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1554 |
Symbol | |
ID | 8807323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1653512 |
End bp | 1654204 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003460790 |
Protein GI | 289208724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.335003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGGA TGGCGCGAGT GGTGTTGCCG CATATGCCGC ACCATGTGGT GCAGCGCGGG CATAATCGGC AGGTGGTGTT TGCCGGGGAC GAGGATTACG AGCGGTACCT GGAAGATCTG CGGGAGCTGA GCAGTGCGCT GGACATCCGG GTGTATGCGT ACTGCTTGAT GACGAACCAC GTCCACCTGT TGCTGGGGCC GGGTGAGGAA GTAGCCGCCA TGGGCCGGTT GATGAAGGCG CTGGCGGCGC GGGCCACGCG GTACCGCAAT CGGCTGGAGG GACGGTCCGG TACGCTGTGG GAAGGCCGCT ACAAGTCCAG CCCGGTGCAG ACGGAGACGT ATCTGCTGGC CTGCACGCGG TACATCGAGC TCAACCCGGT ACGGGCGAGG ATGGTGCCAG CGGCCGGTGA CTACGCCTGG TCCAGTTACC GTCAGCGTAT GGGCGAGGAA GAGCAATGGA TCGATCTGGA TCCGGCCTAC CTGGACTTGG CGCACCGCGA AGCCGACCGG CGCGCGCGAT ACGCCCGGTT CGTGGAGCAG GGCGTGCCGG AGCAGGAGCT GACACTGATG CGCGAGGCGT TACAGCGCGG CCAGCTCACG GGCAACCAGC GCTTCGTGGA CGAGGTGGAG CAGATCATCG GCTGCCGCAT TGAGCGCCGC CGCCCCGGCC GCCCGCGATC ATGCCGGGCA TGA
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Protein sequence | MPRMARVVLP HMPHHVVQRG HNRQVVFAGD EDYERYLEDL RELSSALDIR VYAYCLMTNH VHLLLGPGEE VAAMGRLMKA LAARATRYRN RLEGRSGTLW EGRYKSSPVQ TETYLLACTR YIELNPVRAR MVPAAGDYAW SSYRQRMGEE EQWIDLDPAY LDLAHREADR RARYARFVEQ GVPEQELTLM REALQRGQLT GNQRFVDEVE QIIGCRIERR RPGRPRSCRA
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