| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1527 |
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| Symbol | |
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| ID | 8807296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1625721 |
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| End bp | 1627190 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003460767 |
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| Protein GI | 289208701 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.969905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000210459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTCGGGG AGGGCCATGC CAACCCCCTG ATGCAGCGGC GGCGGGCGGG GGTCCTGCTG
CATCCGACCT CGCTACCCGG CAGCGAGCCG GTCGGGACAC TCGGTGGCGA GGCCTACGCC
TTTCTGGACT GGGCGAGCCG CGCGGGCTTT ACGCTGTGGC AGATCCTGCC GCTGCATCCC
CCGCACGAGG ACGGCTCGCC CTATGCATGC ATCTCCGCCT TTGCCGGTGA TGCGCGCCTG
ATCGATCCCC GGTTGCTGGC CGAGCGGGTC GGACTGTCGG CTGACAGCGG CACCGGTGAG
GCCATGCTGG CCCGGGCGCA CGCCCGTTTG AACGAGACCC CGGCGGTCTG GCGGGAGGCA
TACCAACGGT TCTGCGAGGA ACAGGGGCCG GTCTGGCTGG ACGACTACGC CCGCTTCGTG
GTGATCCGCG CTCGCGAACA GGGCCGGCCC TGGTGGGAGT GGGAGCCGTC GCTGCGCGAT
CGTGAGCCGG ACGCGATGGA GCGGATCGAG CACGAGGCGC GCGATGAGCT GGAGCGGGTG
CGCTTCGCAC AGTTTGTGTT TTTCGACCAG TGGCAGGACC TGCGTCGTCG GGCGCAGGAC
CTGGATATCC TGATCCTGGG TGACATGCCG ATCTTCGTTG CGCACGACTC GGCGGATGTC
TGGACCCATC GCGACCTGTT CGACCTGGAC GAGACGGGCC ACCCGCTTAC GGTGGCGGGC
GTGCCCCCAG ACTACTTCTC CGAGACCGGG CAGCGCTGGG GCAACCCCCA GTACCACTGG
GACCGGCTGG AGGCCACCGG CTACCGCTGG TGGGTCGAGC GCATGCGCTG GGCGCTGCAG
ACACTGGATG CGGTGCGTAT CGACCACTTC CGTGGCTTCG AGGCGAGTTG GGGGATCCCG
GCCGAGGAGC CGGACGCGAC TAATGGCCGC TGGGTGCCTG GCCCAGGCGA GCCGTTCTTT
CGCCGCCTGC AGGACGAACT GGGCACGCTG CCGTTGCTGG CCGAAGACCT CGGCGTGATC
ACTCCCGAGG TGACGGCGCT GCGCCAGCAT TTCGATCTGC CGGGCATGCG CATCCTGCAG
TTCGCCTTCG AGGGCGGCGG GGACAACCCG TACCTGCCGA ATAACCACGA CGAGGCCAGC
GCCGTTTATA CCGGGACGCA CGACAACGAC ACCACGCTGG GCTGGTTTCA CTCGCTCTCC
CCCGAGATGC AGGCGCACGT GATCAACACC CTGAACGAGG GCGGGGCCGA GGAGATGCCG
TGGCCGCTGA TCCGCGCCGC CTATCGTTCC GTGGCGCAGT TGGCCATTGT GCCCATGCAG
GACGCGCTCG CCCTGGACAC CCGGGCCCGG ATGAACCGCC CCGGTACGAT GGACGATGGC
AACTGGCGCT GGCGCTTCTC CTGGAAACAG GTTCCCGAGA GCCGCGCCGC CGAACTCCAG
GCCCTGGCGC GCGAGACGAA TCGCCTGTAG
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| Protein sequence | MVGEGHANPL MQRRRAGVLL HPTSLPGSEP VGTLGGEAYA FLDWASRAGF TLWQILPLHP
PHEDGSPYAC ISAFAGDARL IDPRLLAERV GLSADSGTGE AMLARAHARL NETPAVWREA
YQRFCEEQGP VWLDDYARFV VIRAREQGRP WWEWEPSLRD REPDAMERIE HEARDELERV
RFAQFVFFDQ WQDLRRRAQD LDILILGDMP IFVAHDSADV WTHRDLFDLD ETGHPLTVAG
VPPDYFSETG QRWGNPQYHW DRLEATGYRW WVERMRWALQ TLDAVRIDHF RGFEASWGIP
AEEPDATNGR WVPGPGEPFF RRLQDELGTL PLLAEDLGVI TPEVTALRQH FDLPGMRILQ
FAFEGGGDNP YLPNNHDEAS AVYTGTHDND TTLGWFHSLS PEMQAHVINT LNEGGAEEMP
WPLIRAAYRS VAQLAIVPMQ DALALDTRAR MNRPGTMDDG NWRWRFSWKQ VPESRAAELQ
ALARETNRL
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