| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1468 |
|---|
| Symbol | |
|---|
| ID | 8807234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1560003 |
|---|
| End bp | 1560752 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_003460708 |
|---|
| Protein GI | 289208642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC CCGACGTGAA CAACCCCTCC GCGGAACCCG CCTACTGGGC CCTGATTCCG
GCGGCCGGCG TGGGCAGGCG CATGGGCTCG GACCGACCCA AGCAGTTCCT CACGCTGGGC
TCGCGCACCA TCCTCTCGCA TACCCTGTCG ATCTTTCTGG AACACCCCCG CATCCGCGGT
GTGGTCCTGG TGCTGGGGCC GGATGTGGAC CCGGACGCGC TGGATCTTCC GACGGCGGGC
GGGCGCCTGT TTCGGGTAGC CGGTGGTGAC GAGCGGGCCG ATTCGGTCCA GAACGGCCTC
GATTTTCTCC AGGATCGGGC TTCTCCCGAC GACTGGGTGC TGGTGCACGA CGCGGCACGC
CCCTGTCTGC CACGCGCCGA CCTGGACTCT CTTCTGAACG CGTTGCGGGA CGATCCGGTG
GGCGGGCTGC TGGCCACGCC CAGCACGGAT ACGGTCAAGT GGAGTGACGA GGAAGGGCGC
GTCGAGCGGA CCCTGGAACG CGAACGCGTC TGGCGCGCGC TGACCCCGCA GATGTTCCGC
CTGGGCATGC TGCGGGAGGC CAATCGGGCC GCGCGCGAGG CCGGCCATCC GGTGACCGAC
GAGGCCAGCG CGATCGAATG GCATGGCGCC CGTCCGCGGC TGATCGAGGG CTCGATGATG
AACATCAAGA TCACCCGCGC CGAGGATCTG GAGCTGGCCC AGCTGTACCT GATGCAGCAG
AGACGTCTGG ACGGGGGTTT CCGGCCATGA
|
|---|
| Protein sequence | MADPDVNNPS AEPAYWALIP AAGVGRRMGS DRPKQFLTLG SRTILSHTLS IFLEHPRIRG
VVLVLGPDVD PDALDLPTAG GRLFRVAGGD ERADSVQNGL DFLQDRASPD DWVLVHDAAR
PCLPRADLDS LLNALRDDPV GGLLATPSTD TVKWSDEEGR VERTLERERV WRALTPQMFR
LGMLREANRA AREAGHPVTD EASAIEWHGA RPRLIEGSMM NIKITRAEDL ELAQLYLMQQ
RRLDGGFRP
|
|---|
| |