| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1389 |
|---|
| Symbol | |
|---|
| ID | 8807155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1483791 |
|---|
| End bp | 1484237 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | PRC-barrel domain protein |
|---|
| Protein accession | YP_003460631 |
|---|
| Protein GI | 289208565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GCACCTCACT CAAACTCGCA GCCGCGATGA TCCCCGTCCT CGCCTTTGGC
ATGAGCGCCG CCATGGCGGG CGAACACGAG ATGAACGGCA ATGACCGCAA CGCAATGGAG
GAGCGCGATG CCGAAGAACG TCATGATGCC CCTCATATTG ACCGTATGCC GGCGCAGGGA
CTGCATGCCT CCGATCTGAT GGACAAGAAA ATCCATAGCC GGACCGACGA TGATGAGATC
GGCGAGATCA ACGACCTCGT CATCGACCAG GATGGTCGGA TCATCGCCGT CGTAATCGGC
ACCGGCGGTG TTCTGGGTAT GGGCGAGAAG GACATCGCAA TCGCCTGGGA CCGGATTGAC
CGCTCCACCG AAGGCGACGA GGTCAAGCTG TACATCGACA TGGACGAGGA CACCCTGAAA
GAAGCGCCCG AGTACGAACG CGACTAG
|
|---|
| Protein sequence | MKKRTSLKLA AAMIPVLAFG MSAAMAGEHE MNGNDRNAME ERDAEERHDA PHIDRMPAQG
LHASDLMDKK IHSRTDDDEI GEINDLVIDQ DGRIIAVVIG TGGVLGMGEK DIAIAWDRID
RSTEGDEVKL YIDMDEDTLK EAPEYERD
|
|---|
| |