| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1349 |
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| Symbol | |
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| ID | 8807115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1438100 |
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| End bp | 1439329 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003460592 |
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| Protein GI | 289208526 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0580213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC TCTCCACCCT GATCACCTTG GTCCTGTTCC TGTTGGCGGG CGGTGTACTC
GCATGGCTCT TTTGGGGCCC GGACGACGAA CAGGCCTCTT CCGCGCGCGC GGGTGGCGGC
GAGACACGGC CCGTGGCCGT CGCCGTGGCC AGCGTGCAAC AGCAGGATCT GGTGGAACGC
CGCCGTTTCA CCGGCAGTAT CGAGGGTGGC GACCGCATTG TGATCACTCC GCGCGTCGGG
GGCCGTGTGG CCGAGGTCTT CGTGAACCTG GGCGACCGAG TCGAGCCGGG CGACCCCCTG
CTGCAGCTGG ATACCGAGGA ATTCGAGCAG GACGTCACCC AGGCCGAAGC GGAACTTGAA
GTGGCCGAAG CCAGCCTGGC GGAGGCCGTC GCCAGCCGCA ACGCCGCCCA GCGCGACCTG
CAGCGCACCC GCGAGTTGCG GGACCAGGGG ATCGCCTCTC GCTCGGAACT GGAGGCCGCC
GAGACCGAGC TCGCCCTGGC CCAGACCCGG GTCGCCCTGG CCGAGTCGCA GATCCGACAA
CGCCGCTCTG CCCTGCGTAC CCGCGAGATC CAGCTGGGCT ACACGCGTAT CGATGCCGAC
CCGGGAAGCA CCACCCGCTG GGTGGCCGAG CGCCTGGTCG ACCCCGGTTC AGTGATCAGC
GCCAACGAAC CCGCGCTGGC ACTCGTCACC CTGCAGCCGG TGCGCGCGAT CCTGGCCGTC
ACCGAGGCGG ATTATTCGAG GATCTCGCGC GGCCAGGAAG CCACCGTGCG CACCTCCTCG
TACCCCGACG CGTTATTCGA AGGCACCATC ACGCGGATCT CCCCCGAGTT TCGCCCGGGT
TCGCGCCAGG CGCGGATCGA GGTCGAGGTA CCGAACGATG ATGAACGGCT GCGGCCCGGG
ATGTTTGTCG AGACCGCGAT CACCCTTGGC CAGCGCTCGG ACACCCTGGC GATCCCTCGG
GATGCCATCA TTCAGCGTGA AGCGGGCCCC ACCCTGTTCA GCGTAGACCG TAGCGGCGAA
CGGCCCACGG CGCGCCGCCA CATGGCCGTT ACCGGCGTGC GGGACGGCAA CTGGATCGAA
CTGCTGGAGC CCGAGCTGCC CGAGGGCACC GAAGTGGTGG TGCTCGGGCA GCACCTGCTC
GCCGATGGCA CCCCGCTTCG CCTGACCGAC CCGCGCAGTG TGCCCGGGGC GGACTTCGCC
CCGGGCCTGT CGGAGACCGA AGAGCCGTGA
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| Protein sequence | MPKLSTLITL VLFLLAGGVL AWLFWGPDDE QASSARAGGG ETRPVAVAVA SVQQQDLVER
RRFTGSIEGG DRIVITPRVG GRVAEVFVNL GDRVEPGDPL LQLDTEEFEQ DVTQAEAELE
VAEASLAEAV ASRNAAQRDL QRTRELRDQG IASRSELEAA ETELALAQTR VALAESQIRQ
RRSALRTREI QLGYTRIDAD PGSTTRWVAE RLVDPGSVIS ANEPALALVT LQPVRAILAV
TEADYSRISR GQEATVRTSS YPDALFEGTI TRISPEFRPG SRQARIEVEV PNDDERLRPG
MFVETAITLG QRSDTLAIPR DAIIQREAGP TLFSVDRSGE RPTARRHMAV TGVRDGNWIE
LLEPELPEGT EVVVLGQHLL ADGTPLRLTD PRSVPGADFA PGLSETEEP
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